Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 4.7e-106 387.9 199 100.0
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 4.7e-37 158.7 162 56.8
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 1.0e-36 157.5 162 54.9
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 2.0e-35 153.3 162 55.6
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 9.8e-35 151.0 157 55.4
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.7e-32 142.9 157 52.9
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 4.5e-32 142.1 160 53.1
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 1.0e-31 141.0 167 51.5
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.7e-31 140.2 173 52.6
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 1.7e-31 140.2 138 55.1
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 2.2e-31 139.8 158 51.9
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.9e-31 139.4 102 69.6
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 8.5e-31 137.9 156 50.6
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.9e-30 136.7 158 51.9
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 1.9e-30 136.7 165 49.7
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 2.5e-30 136.3 107 69.2
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 3.6e-29 132.5 161 49.7
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 4.7e-29 132.1 139 54.0
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.0e-28 131.0 156 49.4
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.8e-28 130.2 140 53.6
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 5.2e-28 128.6 144 49.3
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 6.8e-28 128.3 147 52.4
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.5e-27 127.1 155 49.7
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 2.0e-27 126.7 164 51.2
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 2.0e-27 126.7 111 60.4
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 2.6e-27 126.3 147 53.1
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 3.4e-27 125.9 95 68.4
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 4.4e-27 125.6 129 54.3
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 5.7e-27 125.2 163 47.9
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 7.5e-27 124.8 162 49.4
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 7.5e-27 124.8 138 54.3
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 7.5e-27 124.8 159 50.9
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 7.5e-27 124.8 159 50.9
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 9.8e-27 124.4 148 50.7
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.3e-26 124.0 140 55.0
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.3e-26 124.0 159 50.9
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 3.7e-26 122.5 94 67.0
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 3.7e-26 122.5 138 53.6
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 4.9e-26 122.1 158 48.1
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 8.3e-26 121.3 106 60.4
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.1e-25 120.9 112 60.7
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.1e-25 120.9 149 50.3
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 1.4e-25 120.6 162 45.7
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.4e-25 120.6 161 48.4
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.8e-25 120.2 137 51.8
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 4.1e-25 119.0 110 60.0
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 7.0e-25 118.2 129 52.7
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 7.0e-25 118.2 157 47.8
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 1.2e-24 117.5 100 66.0
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-24 117.5 148 50.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 1.2e-24 117.5 99 62.6
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.2e-24 117.5 96 67.7
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.6e-24 117.1 163 46.0
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 1.6e-24 117.1 107 59.8
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 2.0e-24 116.7 129 51.2
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 5.9e-24 115.2 107 58.9
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.0e-23 114.4 112 56.2
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 1.0e-23 114.4 156 47.4
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.3e-23 114.0 126 49.2
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 1.7e-23 113.6 153 45.8
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.7e-23 113.6 107 58.9
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.3e-23 113.2 94 64.9
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 2.3e-23 113.2 166 47.0
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 2.3e-23 113.2 97 64.9
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 2.9e-23 112.8 153 45.1
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 8.6e-23 111.3 96 61.5
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 8.6e-23 111.3 152 43.4
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 3.3e-22 109.4 91 60.4
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 4.3e-22 109.0 96 61.5
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 5.6e-22 108.6 94 62.8
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 9.5e-22 107.8 165 43.0
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 2.8e-21 106.3 86 62.8
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 2.8e-21 106.3 77 67.5
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 2.8e-21 106.3 164 47.0
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 3.6e-21 105.9 160 45.0
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 1.0e-20 104.4 146 44.5
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.4e-20 104.0 158 43.0
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 2.3e-20 103.2 78 70.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.0e-20 102.8 85 63.5
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 4.0e-20 102.4 148 40.5
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 6.8e-20 101.7 75 65.3
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 1.2e-19 100.9 85 62.4
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.5e-19 100.5 145 44.1
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 3.4e-19 99.4 105 47.6
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 4.4e-19 99.0 85 60.0
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 4.4e-19 99.0 93 51.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 1.3e-18 97.4 85 58.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.7e-18 97.1 62 83.9
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 2.9e-18 96.3 82 62.2
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 4.9e-18 95.5 85 60.0
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 6.4e-18 95.1 86 61.6
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 7.0e-17 91.7 151 37.7
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 3.5e-16 89.4 90 55.6
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.7e-15 87.0 64 73.4
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.1e-12 77.8 115 36.5
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 4.0e-12 75.9 53 77.4
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 4.4e-11 72.4 120 37.5
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 1.1e-09 67.8 124 35.5
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 1.6e-08 63.9 95 38.9
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 2.7e-08 63.2 65 44.6
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 6.0e-08 62.0 87 43.7
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 6.6e-07 58.5 46 56.5


User provided reference genes

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