Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 5.1e-297 1023.8 590 100.0
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 6.9e-153 545.0 561 64.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.0e-145 519.2 563 61.3
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 5.5e-142 508.8 558 60.8
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 3.5e-141 506.1 562 58.5
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 3.3e-139 499.6 575 58.8
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 3.2e-134 483.0 565 59.3
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 5.5e-134 482.3 552 58.5
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 7.2e-134 481.9 548 60.2
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.7e-133 479.9 562 58.5
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.5e-131 473.4 564 58.5
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.8e-129 467.2 507 60.4
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.4e-129 466.8 526 59.3
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 4.5e-128 462.6 524 60.1
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 8.5e-127 458.4 665 51.4
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.2e-125 454.5 519 57.8
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 5.7e-123 445.7 527 56.5
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.2e-122 443.7 422 66.8
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 2.8e-122 443.4 565 55.4
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 3.7e-122 443.0 527 55.6
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 3.1e-121 439.9 554 55.8
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 4.1e-121 439.5 531 57.6
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 2.0e-120 437.2 561 56.5
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 2.9e-119 433.3 553 55.2
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.5e-119 432.2 574 56.1
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 6.5e-119 432.2 561 53.3
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 8.5e-119 431.8 539 55.7
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.1e-118 431.4 525 56.4
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 5.5e-118 429.1 560 56.8
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 7.2e-118 428.7 517 57.4
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.2e-117 427.9 499 59.5
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.4e-116 424.5 467 61.9
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.1e-115 421.4 536 53.2
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 7.4e-115 418.7 490 55.7
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 9.1e-113 411.8 536 53.7
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.2e-112 411.4 490 56.7
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.0e-112 410.6 565 43.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.0e-111 408.3 536 55.6
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 8.5e-111 405.2 556 54.0
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.1e-110 404.8 560 53.4
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 3.2e-110 403.3 566 52.7
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 2.7e-109 400.2 458 57.9
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.6e-109 399.8 559 54.7
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.3e-108 397.1 478 58.8
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 8.8e-108 395.2 567 54.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.2e-107 394.8 496 55.8
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 5.7e-107 392.5 517 52.4
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.7e-106 391.0 483 59.4
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 3.7e-106 389.8 561 50.8
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 4.1e-105 386.3 542 53.0
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 5.3e-105 386.0 551 52.6
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.7e-103 380.9 561 51.0
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.5e-102 377.1 489 55.6
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 5.2e-100 369.4 556 51.6
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 5.7e-99 365.9 467 56.7
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 7.5e-99 365.5 566 50.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 7.5e-99 365.5 596 48.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.4e-97 361.3 539 51.2
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.4e-97 361.3 532 43.8
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 3.1e-97 360.1 532 52.1
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 3.1e-97 360.1 539 51.0
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 4.1e-97 359.8 459 58.0
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.7e-96 357.1 566 49.6
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 1.3e-95 354.8 331 59.8
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.7e-95 354.4 376 65.7
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.9e-95 353.6 506 51.4
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 3.8e-95 353.2 533 51.8
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 1.9e-94 350.9 561 50.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 7.2e-94 349.0 471 46.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 9.2e-89 332.0 567 49.6
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 2.7e-88 330.5 338 68.9
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.5e-86 324.7 565 46.4
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 6.4e-82 309.3 374 60.2
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.7e-80 303.9 294 55.4
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.9e-79 300.1 329 53.5
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 4.7e-77 293.1 326 50.9
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.4e-73 281.6 537 45.8
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 5.6e-70 269.6 266 56.0
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-66 258.5 276 52.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 3.5e-64 250.4 557 42.5
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 5.1e-63 246.5 434 38.0
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 7.8e-56 222.6 326 57.1
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 5.6e-54 216.5 327 56.3
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 4.9e-50 203.4 239 66.9
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.3e-46 190.7 277 61.7
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 3.6e-45 187.2 182 52.2
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 7.9e-40 169.5 396 42.7
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 3.0e-39 167.5 131 61.8
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 2.4e-36 157.9 184 47.3
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.5e-35 155.2 123 65.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.5e-35 155.2 442 36.7
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.7e-34 151.8 100 76.0
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 2.5e-30 137.9 195 44.1
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.6e-29 135.2 183 48.1
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 1.1e-28 132.5 509 25.3
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.4e-27 127.5 124 51.6
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 7.9e-24 116.3 146 48.6
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 3.9e-23 114.0 122 50.0
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-22 110.9 105 52.4
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 2.0e-19 101.7 139 42.4
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 2.9e-18 97.8 100 54.0
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 6.5e-18 96.7 175 41.1
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 8.5e-18 96.3 143 43.4
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 1.2e-16 92.4 208 32.7
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 5.1e-15 87.0 68 63.2
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 9.7e-14 82.8 123 39.8
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 2.8e-13 81.3 100 43.0
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 8.2e-13 79.7 73 57.5
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 2.0e-11 75.1 242 28.9
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 2.6e-11 74.7 82 52.4
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.8e-10 70.9 48 68.8
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 1.9e-09 68.6 60 56.7
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 4.2e-09 67.4 62 54.8
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.1e-08 65.1 42 73.8
QL02p059301 Quercus lobata HOM05D006674 ORTHO05D012891 1.1e-06 59.3 45 68.9
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.5e-06 58.9 62 51.6
SEGI_22938 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 3.3e-06 57.8 88 37.5
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 7.4e-06 56.6 78 41.0


User provided reference genes

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