Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24365 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.2e-39 166.0 82 100.0
Nn2g13316 Nelumbo nucifera HOM05D000448 ORTHO05D000291 5.8e-34 147.1 81 91.4
Nn1g05267 Nelumbo nucifera HOM05D000448 ORTHO05D000291 3.6e-28 127.9 75 85.3
Nn4g25436 Nelumbo nucifera HOM05D000448 ORTHO05D000291 7.6e-26 120.2 61 93.4
Nn8g41108 Nelumbo nucifera HOM05D000448 ORTHO05D000291 4.2e-24 114.4 75 77.3
Nn1g04197 Nelumbo nucifera HOM05D000448 ORTHO05D000291 2.1e-15 85.5 51 78.4
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 4.5e-10 67.8 72 44.4
AUR62008893 Chenopodium quinoa HOM05D000448 ORTHO05D000313 5.0e-09 64.3 71 45.1
Hma1.2p1_2284F.1_g318890 Hydrangea macrophylla HOM05D000448 ORTHO05D000313 1.9e-08 62.4 72 51.4
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 2.5e-08 62.0 72 45.8
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 3.2e-08 61.6 71 45.1
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.2e-08 61.6 76 39.5
TAR383G0315 Trochodendron aralioides HOM05D000448 ORTHO05D000291 4.2e-08 61.2 67 47.8
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 9.3e-08 60.1 75 41.3
MELO3C025814.2 Cucumis melo HOM05D000448 ORTHO05D000291 9.3e-08 60.1 73 39.7
Hma1.2p1_2573F.1_g324636 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.2e-07 59.7 67 50.7
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.1e-07 58.9 71 42.3
AUR62031816 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.1e-07 58.9 71 43.7
Sopen08g009070 Solanum pennellii HOM05D000448 ORTHO05D000291 2.1e-07 58.9 68 47.1
AUR62009254 Chenopodium quinoa HOM05D000480 ORTHO05D000313 3.5e-07 58.2 75 40.0
Hma1.2p1_2573F.1_g324643 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 3.5e-07 58.2 67 50.7
Hma1.2p1_2573F.1_g324650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 3.5e-07 58.2 67 50.7
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.1e-07 57.4 75 40.0
MBI02_g28325_MAGBIO Magnolia biondii HOM05D000480 ORTHO05D000313 7.9e-07 57.0 63 46.0
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.0e-06 56.6 75 40.0
AUR62043768 Chenopodium quinoa HOM05D000448 ORTHO05D000313 1.0e-06 56.6 73 39.7
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 1.0e-06 56.6 74 43.2
AUR62004918 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 56.2 73 43.8
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.8e-06 55.8 75 40.0
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.0e-06 55.1 76 40.8
TAR023G0002 Trochodendron aralioides HOM05D000480 ORTHO05D000313 3.9e-06 54.7 75 40.0
AL3G14640 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 5.1e-06 54.3 71 42.3
GSVIVG01030638001 Vitis vinifera HOM05D000480 ORTHO05D000313 5.1e-06 54.3 75 38.7
Peaxi162Scf00565g00065 Petunia axillaris HOM05D000448 ORTHO05D000291 6.7e-06 53.9 69 42.0
BcaC01g04362 Brassica carinata HOM05D000264 ORTHO05D000152 8.7e-06 53.5 71 40.8
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 8.7e-06 53.5 71 40.8
BolC3t16381H Brassica oleracea HOM05D000264 ORTHO05D000152 8.7e-06 53.5 71 40.8
BolC3t16390H Brassica oleracea HOM05D000264 ORTHO05D000152 8.7e-06 53.5 71 40.8
AUR62001038 Chenopodium quinoa HOM05D000448 ORTHO05D000291 8.7e-06 53.5 71 43.7


User provided reference genes

Program Settings