Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24127 Nelumbo nucifera HOM05D000355 ORTHO05D000227 8.8e-44 179.9 89 100.0
Nn2g13099 Nelumbo nucifera HOM05D000355 ORTHO05D000227 2.8e-18 95.1 109 51.4
Nn2g13100 Nelumbo nucifera HOM05D000355 ORTHO05D000227 2.8e-18 95.1 109 51.4
TAR623G0893 Trochodendron aralioides HOM05D000355 ORTHO05D000227 5.4e-17 90.9 105 46.7
Nn1g01728 Nelumbo nucifera HOM05D000355 ORTHO05D000227 1.2e-16 89.7 89 56.2
TAR629G0099 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.9e-15 85.1 110 45.5
Nn5g30666 Nelumbo nucifera HOM05D000355 ORTHO05D000227 3.6e-13 78.2 84 54.8
CSS0020982 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 1.8e-12 75.9 104 38.5
Nitab4.5_0004624g0030 Nicotiana tabacum HOM05D000355 ORTHO05D000227 5.2e-12 74.3 109 36.7
Peaxi162Scf00270g00064 Petunia axillaris HOM05D000355 ORTHO05D000227 2.0e-11 72.4 108 39.8
TAR633G2794 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.0e-11 72.4 110 44.5
TAR369G0347 Trochodendron aralioides HOM05D000355 ORTHO05D000227 5.7e-11 70.9 110 42.7
Lsat_1_v5_gn_6_45881 Lactuca sativa HOM05D000355 ORTHO05D000227 9.8e-11 70.1 114 40.4
Hma1.2p1_0058F.1_g032490 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 8.3e-10 67.0 105 41.9
Dinv32741 Davidia involucrata HOM05D000355 ORTHO05D000227 1.4e-09 66.2 60 48.3
HanXRQChr14g0452791 Helianthus annuus HOM05D000355 ORTHO05D000227 3.1e-09 65.1 111 36.0
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 5.4e-09 64.3 112 39.3
Actinidia13996 Actinidia chinensis HOM05D000355 ORTHO05D000227 5.4e-09 64.3 112 39.3
Hma1.2p1_0055F.1_g031520 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 5.4e-09 64.3 111 38.7
SalBow3G4139 Salvia bowleyana HOM05D000355 ORTHO05D000227 1.2e-08 63.2 98 40.8
Sopen06g031580 Solanum pennellii HOM05D000355 ORTHO05D000227 1.0e-07 60.1 110 34.5
FvH4_3g32220 Fragaria vesca HOM05D000355 ORTHO05D000227 1.3e-07 59.7 115 34.8
FAN11G2838 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.3e-07 59.7 115 34.8
AL8G37270 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 1.7e-07 59.3 96 41.7
Cpa.g.sc216.3 Carica papaya HOM05D000355 ORTHO05D000227 1.7e-07 59.3 115 39.1
Haze_23821 Corylus avellana HOM05D000355 ORTHO05D000227 1.7e-07 59.3 112 36.6
CSS0000055 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 2.3e-07 58.9 99 34.3
FAN21G3873 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.3e-07 58.9 114 36.0
Lsat_1_v5_gn_2_100100 Lactuca sativa HOM05D000355 ORTHO05D000227 2.3e-07 58.9 102 37.3
Solyc06g075170.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 2.3e-07 58.9 110 34.5
Solyc11g069450.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 5.0e-07 57.8 108 34.3
PGSC0003DMG400008052 Solanum tuberosum HOM05D000355 ORTHO05D000227 5.0e-07 57.8 105 34.3
FAN25G1122 Fragaria x ananassa HOM05D000355 ORTHO05D000227 6.6e-07 57.4 115 36.5
Nitab4.5_0000106g0180 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.1e-06 56.6 111 36.9
Oeu001276.1 Olea europaea HOM05D000355 ORTHO05D000227 1.1e-06 56.6 106 36.8
MSTRG.21122 Avicennia marina HOM05D000355 ORTHO05D000227 1.5e-06 56.2 107 35.5
PSO339G2251 Papaver somniferum HOM05D000355 ORTHO05D000227 1.5e-06 56.2 116 38.8
AT5G60680 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 1.9e-06 55.8 100 39.0
Cfa011313 Carpinus fangiana HOM05D000355 ORTHO05D000227 2.5e-06 55.5 113 34.5
Nitab4.5_0001075g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.5e-06 55.5 112 35.7
RcHm_v2.0_Chr5g0058841 Rosa chinensis HOM05D000355 ORTHO05D000227 2.5e-06 55.5 117 34.2
Sopen11g028170 Solanum pennellii HOM05D000355 ORTHO05D000227 2.5e-06 55.5 108 30.6
Aqoxy1G01234 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 3.3e-06 55.1 75 34.7
Nitab4.5_0003214g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 3.3e-06 55.1 109 32.1
Carub.0008s2136 Capsella rubella HOM05D000355 ORTHO05D000227 4.3e-06 54.7 117 35.0
Dinv37284 Davidia involucrata HOM05D000355 ORTHO05D000227 4.3e-06 54.7 100 34.0
Oeu030187.1 Olea europaea HOM05D000355 ORTHO05D000227 4.3e-06 54.7 105 37.1
BcaC03g13955 Brassica carinata HOM05D000355 ORTHO05D000227 5.6e-06 54.3 112 34.8
BolC2t07241H Brassica oleracea HOM05D000355 ORTHO05D000227 5.6e-06 54.3 112 34.8
BcaC04g19729 Brassica carinata HOM05D000355 ORTHO05D000227 7.3e-06 53.9 101 35.6
C09p53410 Brassica napus HOM05D000355 ORTHO05D000227 7.3e-06 53.9 101 35.6
BolC9t58214H Brassica oleracea HOM05D000355 ORTHO05D000227 7.3e-06 53.9 101 35.6
Lj2P1027T37 Lonicera japonica HOM05D000355 ORTHO05D000227 7.3e-06 53.9 101 37.6
MBI10_g05406_MAGBIO Magnolia biondii HOM05D000355 ORTHO05D000227 9.5e-06 53.5 107 38.3
MD03G1118100 Malus domestica HOM05D000355 ORTHO05D000227 9.5e-06 53.5 114 35.1


User provided reference genes

Program Settings