Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 2.5e-52 208.4 96 100.0
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 9.8e-25 116.7 100 57.0
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 4.6e-22 107.8 96 56.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 7.8e-22 107.1 91 57.1
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 1.0e-21 106.7 91 57.1
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 1.3e-21 106.3 87 56.3
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 1.7e-21 105.9 93 59.1
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 1.7e-21 105.9 93 58.1
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 1.7e-21 105.9 96 57.3
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 2.3e-21 105.5 92 57.6
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 3.0e-21 105.1 94 58.5
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 5.1e-21 104.4 93 58.1
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 5.1e-21 104.4 93 58.1
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 5.1e-21 104.4 92 56.5
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 5.1e-21 104.4 92 56.5
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 6.6e-21 104.0 84 60.7
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 6.6e-21 104.0 91 57.1
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 8.6e-21 103.6 91 56.0
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 8.6e-21 103.6 91 56.0
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 1.1e-20 103.2 88 58.0
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 1.5e-20 102.8 100 52.0
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 1.5e-20 102.8 88 58.0
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 1.9e-20 102.4 86 59.3
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.9e-20 102.4 83 59.0
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 1.9e-20 102.4 92 57.6
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 2.5e-20 102.1 90 55.6
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 3.3e-20 101.7 102 51.0
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 3.3e-20 101.7 87 57.5
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 4.3e-20 101.3 87 56.3
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 7.3e-20 100.5 91 57.1
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 7.3e-20 100.5 91 57.1
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 7.3e-20 100.5 94 52.1
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 7.3e-20 100.5 81 59.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 9.5e-20 100.1 102 51.0
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 9.5e-20 100.1 90 55.6
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 9.5e-20 100.1 86 59.3
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 1.6e-19 99.4 93 55.9
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 1.6e-19 99.4 91 54.9
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 1.6e-19 99.4 90 54.4
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 1.6e-19 99.4 93 55.9
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 2.1e-19 99.0 81 59.3
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 2.1e-19 99.0 94 54.3
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 2.1e-19 99.0 93 57.0
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 2.1e-19 99.0 81 60.5
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 2.1e-19 99.0 86 58.1
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 2.1e-19 99.0 82 59.8
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 2.1e-19 99.0 81 60.5
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 2.1e-19 99.0 81 60.5
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 3.6e-19 98.2 86 57.0
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 3.6e-19 98.2 93 55.9
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 4.7e-19 97.8 88 56.8
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 6.2e-19 97.4 98 53.1
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 6.2e-19 97.4 91 50.5
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 8.1e-19 97.1 87 57.5
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 1.1e-18 96.7 100 51.0
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 1.1e-18 96.7 81 59.3
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 1.4e-18 96.3 91 53.8
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 1.8e-18 95.9 93 54.8
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 2.3e-18 95.5 115 46.1
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 3.1e-18 95.1 118 44.1
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 4.0e-18 94.7 88 55.7
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 5.2e-18 94.4 96 54.2
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 5.2e-18 94.4 96 54.2
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 5.2e-18 94.4 91 51.6
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 6.8e-18 94.0 104 46.2
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 8.9e-18 93.6 88 54.5
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 8.9e-18 93.6 88 54.5
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 8.9e-18 93.6 88 54.5
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 8.9e-18 93.6 87 52.9
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 1.5e-17 92.8 90 53.3
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 2.0e-17 92.4 86 55.8
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 2.6e-17 92.0 88 53.4
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 7.6e-17 90.5 122 42.6
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.3e-16 89.7 88 52.3
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 1.3e-16 89.7 91 51.6
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.4e-15 86.3 79 53.2
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 2.4e-15 85.5 96 45.8
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 3.2e-15 85.1 36 94.4
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 9.2e-15 83.6 72 58.3
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 9.2e-15 83.6 94 47.9
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 3.5e-14 81.6 88 44.3
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 7.8e-14 80.5 37 86.5
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 7.8e-14 80.5 60 63.3
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 2.3e-13 79.0 81 48.1
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 3.9e-13 78.2 37 83.8
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 6.6e-13 77.4 81 45.7
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 6.6e-13 77.4 37 83.8
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 6.6e-13 77.4 37 83.8
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.5e-12 75.5 81 46.9
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 4.3e-12 74.7 37 83.8
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 7.3e-12 73.9 37 78.4
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 1.6e-11 72.8 34 82.4
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 2.0e-09 65.9 83 43.4
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 2.1e-06 55.8 83 32.5
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 7.8e-06 53.9 37 59.5


User provided reference genes

Program Settings