Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.8e-45 184.9 92 100.0
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 5.5e-41 170.6 90 90.0
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 7.2e-41 170.2 91 87.9
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 7.2e-41 170.2 90 88.9
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 3.6e-40 167.9 90 91.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.0e-39 166.4 90 90.0
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.0e-39 166.4 90 90.0
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 1.4e-39 166.0 91 84.6
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 1.8e-39 165.6 90 87.8
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.3e-39 165.2 90 87.8
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.3e-39 165.2 90 86.7
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 3.9e-39 164.5 89 87.6
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.1e-38 162.9 90 85.6
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.1e-38 162.9 90 84.4
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.1e-38 162.9 90 84.4
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.5e-38 162.5 90 85.6
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.0e-38 162.2 89 85.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 2.0e-38 162.2 88 87.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.6e-38 161.8 90 84.4
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 2.6e-38 161.8 90 84.4
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 2.6e-38 161.8 90 83.3
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 2.6e-38 161.8 90 82.2
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 3.3e-38 161.4 90 84.4
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 3.3e-38 161.4 89 84.3
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 4.4e-38 161.0 90 83.3
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.4e-38 161.0 90 85.6
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 7.4e-38 160.2 89 84.3
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 7.4e-38 160.2 88 87.5
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 9.7e-38 159.8 90 84.4
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.3e-37 159.5 88 84.1
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.3e-37 159.5 90 85.6
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.3e-37 159.5 88 86.4
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 2.2e-37 158.7 91 81.3
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.2e-37 158.7 91 81.3
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.2e-37 158.7 91 81.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.2e-37 158.7 90 83.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.8e-37 158.3 88 84.1
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 2.8e-37 158.3 90 82.2
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 3.7e-37 157.9 91 81.3
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 3.7e-37 157.9 90 82.2
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.7e-37 157.9 88 83.0
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 4.8e-37 157.5 88 85.2
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 6.3e-37 157.1 86 84.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 6.3e-37 157.1 88 86.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 6.3e-37 157.1 90 82.2
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.1e-36 156.4 91 81.3
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.4e-36 156.0 88 83.0
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.4e-36 156.0 91 79.1
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 2.4e-36 155.2 82 90.2
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 3.1e-36 154.8 89 80.9
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 4.1e-36 154.5 90 82.2
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 4.1e-36 154.5 88 81.8
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 4.1e-36 154.5 91 79.1
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 4.1e-36 154.5 90 83.3
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 5.3e-36 154.1 89 80.9
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 7.0e-36 153.7 86 84.9
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.2e-35 152.9 90 80.0
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.6e-35 151.8 84 85.7
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 3.5e-35 151.4 88 80.7
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.5e-35 151.4 75 97.3
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 3.5e-35 151.4 91 76.9
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 4.5e-35 151.0 88 81.8
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 4.5e-35 151.0 88 80.7
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 5.9e-35 150.6 88 81.8
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.7e-35 150.2 102 72.5
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.3e-34 149.4 88 79.5
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.3e-34 149.4 88 80.7
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.7e-34 149.1 88 80.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.2e-34 148.7 89 78.7
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 2.9e-34 148.3 88 79.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 2.9e-34 148.3 88 79.5
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.9e-34 148.3 86 82.6
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 3.8e-34 147.9 86 80.2
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 3.8e-34 147.9 86 80.2
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 3.8e-34 147.9 86 80.2
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 5.0e-34 147.5 89 78.7
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 8.5e-34 146.7 88 78.4
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.1e-33 146.4 88 79.5
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 78.4
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.5e-33 145.2 86 79.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.2e-33 144.8 103 68.9
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 4.2e-33 144.4 88 77.3
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 7.2e-33 143.7 126 61.1
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 9.4e-33 143.3 88 76.1
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.0e-30 135.6 74 86.5
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 9.7e-30 133.3 69 89.9
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.4e-28 129.4 69 84.1
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 5.3e-28 127.5 78 75.6
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 5.3e-28 127.5 78 75.6
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 1.2e-27 126.3 67 88.1
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.7e-27 125.2 67 89.6
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 4.5e-27 124.4 71 81.7
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 7.7e-27 123.6 68 85.3
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.7e-26 122.5 67 83.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.7e-26 122.5 141 49.6
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 2.9e-26 121.7 72 76.4
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 2.5e-25 118.6 66 83.3
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.2e-25 118.2 67 80.6
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 9.4e-25 116.7 67 77.6
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.2e-24 116.3 65 80.0
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.0e-23 111.7 79 59.5
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 3.0e-23 111.7 67 76.1
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.2e-22 109.8 65 78.5
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 3.7e-21 104.8 81 59.3
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 3.1e-20 101.7 77 62.3
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.9e-17 92.4 65 60.0
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.2e-16 89.7 92 57.6
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 4.7e-16 87.8 67 65.7
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.4e-15 86.3 45 82.2
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 3.5e-11 71.6 71 47.9
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.3e-10 69.7 78 42.3


User provided reference genes

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