Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23759 Nelumbo nucifera HOM05D003846 ORTHO05D004726 6.8e-50 200.3 96 100.0
TAR622G0464 Trochodendron aralioides HOM05D003846 ORTHO05D004726 1.3e-29 132.9 72 83.3
TAR374G1390 Trochodendron aralioides HOM05D003846 ORTHO05D004726 3.0e-29 131.7 72 83.3
Nn3g17770 Nelumbo nucifera HOM05D003846 ORTHO05D004726 2.3e-26 122.1 73 80.8
Aqoxy3G00349 Aquilegia oxysepala HOM05D003846 ORTHO05D004726 7.5e-25 117.1 73 74.0
TWI31G0653 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 7.5e-25 117.1 72 73.6
PSO063G1115 Papaver somniferum HOM05D003846 ORTHO05D004726 1.3e-24 116.3 73 75.3
PSO782G3649 Papaver somniferum HOM05D003846 ORTHO05D004726 1.3e-24 116.3 73 75.3
MBI19_g21095_MAGBIO Magnolia biondii HOM05D003846 ORTHO05D004726 1.7e-24 115.9 73 75.3
Potri.010G128500 Populus trichocarpa HOM05D003846 ORTHO05D004726 1.7e-24 115.9 74 71.6
Cpa.g.sc1.209 Carica papaya HOM05D003846 ORTHO05D004726 2.2e-24 115.5 72 73.6
Dinv07363 Davidia involucrata HOM05D003846 ORTHO05D004726 4.9e-24 114.4 72 75.0
Duzib251G0345 Durio zibethinus HOM05D003846 ORTHO05D004726 4.9e-24 114.4 72 72.2
Manes.06G071100 Manihot esculenta HOM05D003846 ORTHO05D004726 4.9e-24 114.4 72 73.6
ATR0665G367 Amborella trichopoda HOM05D003846 ORTHO05D004726 6.4e-24 114.0 72 72.2
TWI79G0122 Tripterygium wilfordii HOM05D003846 ORTHO05D004726 1.1e-23 113.2 72 70.8
CANSAT64G1970 Cannabis sativa HOM05D003846 ORTHO05D004726 1.4e-23 112.8 72 70.8
CSS0029565 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 1.9e-23 112.5 72 70.8
Gorai.013G080600 Gossypium raimondii HOM05D003846 ORTHO05D004726 4.1e-23 111.3 72 69.4
Prupe.1G306800 Prunus persica HOM05D003846 ORTHO05D004726 4.1e-23 111.3 73 72.6
Gohir.D13G070400 Gossypium hirsutum HOM05D003846 ORTHO05D004726 5.4e-23 110.9 72 69.4
Gohir.A13G053526 Gossypium hirsutum HOM05D003846 ORTHO05D004726 7.1e-23 110.5 72 68.1
Gohir.D13G070700 Gossypium hirsutum HOM05D003846 ORTHO05D004726 7.1e-23 110.5 72 68.1
Gorai.013G080900 Gossypium raimondii HOM05D003846 ORTHO05D004726 7.1e-23 110.5 72 68.1
Haze_18631 Corylus avellana HOM05D003846 ORTHO05D004726 1.2e-22 109.8 73 72.6
Dinv21120 Davidia involucrata HOM05D003846 ORTHO05D004726 1.2e-22 109.8 73 69.9
Gohir.A13G053470 Gossypium hirsutum HOM05D003846 ORTHO05D004726 1.6e-22 109.4 72 69.4
Sp5g23760 Schrenkiella parvula HOM05D003846 ORTHO05D004726 1.6e-22 109.4 72 65.3
CiPaw.16G084800 Carya illinoinensis HOM05D003846 ORTHO05D004726 2.1e-22 109.0 73 75.3
Thhalv10019264m.g Eutrema salsugineum HOM05D003846 ORTHO05D004726 2.1e-22 109.0 72 65.3
THA.LOC104821956 Tarenaya hassleriana HOM05D003846 ORTHO05D004726 3.5e-22 108.2 72 66.7
CSS0009272 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 4.6e-22 107.8 72 70.8
Cfa019801 Carpinus fangiana HOM05D003846 ORTHO05D004726 4.6e-22 107.8 73 71.2
ClCG05G022950 Citrullus lanatus HOM05D003846 ORTHO05D004726 4.6e-22 107.8 72 68.1
MD13G1045100 Malus domestica HOM05D003846 ORTHO05D004726 4.6e-22 107.8 72 68.1
MELO3C012223.2 Cucumis melo HOM05D003846 ORTHO05D004726 6.0e-22 107.5 72 65.3
MD16G1046400 Malus domestica HOM05D003846 ORTHO05D004726 6.0e-22 107.5 72 68.1
Actinidia35079 Actinidia chinensis HOM05D003846 ORTHO05D004726 7.8e-22 107.1 72 69.4
RcHm_v2.0_Chr4g0435651 Rosa chinensis HOM05D003846 ORTHO05D004726 1.0e-21 106.7 71 67.6
GSVIVG01011936001 Vitis vinifera HOM05D003846 ORTHO05D004726 1.0e-21 106.7 72 70.8
Atru.chr11.1333 Acer truncatum HOM05D003846 ORTHO05D004726 1.3e-21 106.3 72 70.8
CiPaw.15G127700 Carya illinoinensis HOM05D003846 ORTHO05D004726 1.3e-21 106.3 73 72.6
CsaV3_5G034070 Cucumis sativus L. HOM05D000040 ORTHO05D000759 1.3e-21 106.3 77 64.9
ClCG04G011240 Citrullus lanatus HOM05D003846 ORTHO05D004726 2.3e-21 105.5 73 69.9
AL2G27580 Arabidopsis lyrata HOM05D003846 ORTHO05D004726 3.0e-21 105.1 73 64.4
Dinv40424 Davidia involucrata HOM05D003846 ORTHO05D004726 3.0e-21 105.1 72 72.2
Sc04g0006620 Simmondsia chinensis HOM05D003846 ORTHO05D004726 3.9e-21 104.8 72 69.4
AT1G68660 Arabidopsis thaliana HOM05D003846 ORTHO05D004726 6.6e-21 104.0 73 64.4
Duzib204G0001 Durio zibethinus HOM05D003846 ORTHO05D004726 8.6e-21 103.6 72 66.7
Ciclev10032968m.g Citrus clementina HOM05D003846 ORTHO05D004726 1.1e-20 103.2 72 68.1
PGSC0003DMG400005627 Solanum tuberosum HOM05D003846 ORTHO05D004726 1.1e-20 103.2 72 68.1
Solyc03g119700.3 Solanum lycopersicum HOM05D003846 ORTHO05D004726 1.5e-20 102.8 72 68.1
Sopen03g038530 Solanum pennellii HOM05D003846 ORTHO05D004726 1.5e-20 102.8 72 68.1
Actinidia31024 Actinidia chinensis HOM05D003846 ORTHO05D004726 2.5e-20 102.1 72 65.3
DCAR_023191 Daucus carota HOM05D003846 ORTHO05D004726 2.5e-20 102.1 73 67.1
Duzib248G0399 Durio zibethinus HOM05D003846 ORTHO05D004726 2.5e-20 102.1 72 66.7
PGR044G0282 Punica granatum HOM05D003846 ORTHO05D004726 2.5e-20 102.1 73 69.9
Lalb_Chr17g0341961 Lupinus albus HOM05D003846 ORTHO05D004726 4.3e-20 101.3 72 62.5
Sed0019100 Sechium edule HOM05D003846 ORTHO05D004726 4.3e-20 101.3 72 63.9
QL10p023733 Quercus lobata HOM05D003846 ORTHO05D004726 1.2e-19 99.8 79 63.3
Carub.0002s1520 Capsella rubella HOM05D003846 ORTHO05D004726 1.6e-19 99.4 73 60.3
CARHR061470 Cardamine hirsuta HOM05D003846 ORTHO05D004726 1.6e-19 99.4 73 61.6
CDE05G0888 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 1.6e-19 99.4 71 63.4
Nitab4.5_0001599g0080 Nicotiana tabacum HOM05D003846 ORTHO05D004726 3.6e-19 98.2 72 65.3
Nitab4.5_0010565g0020 Nicotiana tabacum HOM05D003846 ORTHO05D004726 3.6e-19 98.2 72 65.3
BraA07t30817Z Brassica rapa HOM05D003846 ORTHO05D004726 4.7e-19 97.8 73 61.6
MELO3C002078.2 Cucumis melo HOM05D003846 ORTHO05D004726 6.2e-19 97.4 73 67.1
Peaxi162Scf00015g00824 Petunia axillaris HOM05D003846 ORTHO05D004726 8.1e-19 97.1 72 63.9
vmacro16453 Vaccinium macrocarpon HOM05D003846 ORTHO05D004726 8.1e-19 97.1 72 62.5
Eucgr.K02665 Eucalyptus grandis HOM05D003846 ORTHO05D004726 1.1e-18 96.7 90 63.3
C06p37450 Brassica napus HOM05D003846 ORTHO05D004726 2.3e-18 95.5 74 62.2
BolC6t38848H Brassica oleracea HOM05D003846 ORTHO05D004726 2.3e-18 95.5 74 62.2
CsaV3_1G006510 Cucumis sativus L. HOM05D003846 ORTHO05D004726 2.3e-18 95.5 73 65.8
AUR62002909 Chenopodium quinoa HOM05D003846 ORTHO05D004726 3.1e-18 95.1 72 63.9
Lalb_Chr10g0099871 Lupinus albus HOM05D003846 ORTHO05D004726 4.0e-18 94.7 72 59.7
EL10Ac6g14463 Beta vulgaris HOM05D003846 ORTHO05D004726 5.2e-18 94.4 72 61.1
A07p31880 Brassica napus HOM05D003846 ORTHO05D004726 6.8e-18 94.0 74 60.8
BcaC08g45948 Brassica carinata HOM05D003846 ORTHO05D004726 8.9e-18 93.6 74 60.8
BolC2t08590H Brassica oleracea HOM05D003846 ORTHO05D004726 8.9e-18 93.6 73 61.6
Hund25092 Selenicereus undatus HOM05D003846 ORTHO05D004726 1.2e-17 93.2 72 63.9
GSVIVG01008253001 Vitis vinifera HOM05D003846 ORTHO05D004726 1.2e-17 93.2 72 63.9
BcaB03g15438 Brassica carinata HOM05D003846 ORTHO05D004726 1.5e-17 92.8 75 61.3
A02p15260 Brassica napus HOM05D003846 ORTHO05D004726 2.0e-17 92.4 73 61.6
BraA02t06588Z Brassica rapa HOM05D003846 ORTHO05D004726 2.0e-17 92.4 73 61.6
CAN.G438.125 Capsicum annuum HOM05D003846 ORTHO05D004726 4.4e-17 91.3 72 58.3
BcaB05g24403 Brassica carinata HOM05D003846 ORTHO05D004726 1.3e-16 89.7 73 61.6
Prupe.5G218600 Prunus persica HOM05D003846 ORTHO05D004726 1.3e-16 89.7 70 65.7
arahy.Tifrunner.gnm1.ann1.72UZVS Arachis hypogaea HOM05D003846 ORTHO05D004726 1.7e-16 89.4 72 59.7
Lj2g0005403 Lotus japonicus HOM05D003846 ORTHO05D004726 1.7e-16 89.4 72 61.1
CDE11G1133 Ceratophyllum demersum HOM05D003846 ORTHO05D004726 2.2e-16 89.0 74 59.5
RcHm_v2.0_Chr7g0184811 Rosa chinensis HOM05D003846 ORTHO05D004726 2.9e-16 88.6 70 62.9
Sed0009794 Sechium edule HOM05D003846 ORTHO05D004726 2.9e-16 88.6 72 62.5
Sed0022338 Sechium edule HOM05D003846 ORTHO05D004726 2.9e-16 88.6 73 64.4
arahy.Tifrunner.gnm1.ann1.6C9V7B Arachis hypogaea HOM05D003846 ORTHO05D004726 3.7e-16 88.2 72 59.7
SEGI_01063 Sequoiadendron giganteum HOM05D003846 ORTHO05D004726 4.9e-16 87.8 75 52.0
Ah.02g127070 Amaranthus hybridus HOM05D003846 ORTHO05D004726 6.4e-16 87.4 74 59.5
FAN18G2723 Fragaria x ananassa HOM05D003846 ORTHO05D004726 1.1e-15 86.7 80 55.0
Glyma.02G098100 Glycine max HOM05D003846 ORTHO05D004726 1.1e-15 86.7 72 59.7
FvH4_5g12540 Fragaria vesca HOM05D003846 ORTHO05D004726 1.9e-15 85.9 71 60.6
FAN04G0089 Fragaria x ananassa HOM05D003846 ORTHO05D004726 1.9e-15 85.9 71 60.6
FAN18G2095 Fragaria x ananassa HOM05D003846 ORTHO05D004726 1.9e-15 85.9 71 60.6
MD14G1223300 Malus domestica HOM05D003846 ORTHO05D004726 1.9e-15 85.9 70 62.9
FAN08G1200 Fragaria x ananassa HOM05D003846 ORTHO05D004726 2.4e-15 85.5 71 59.2
Phvul.003G028500 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 2.4e-15 85.5 72 59.7
Cc04_g07410 Coffea canephora HOM05D003846 ORTHO05D004726 5.4e-15 84.3 72 55.6
FAN13G1296 Fragaria x ananassa HOM05D003846 ORTHO05D004726 7.1e-15 84.0 71 59.2
Ah.03g137840 Amaranthus hybridus HOM05D003846 ORTHO05D004726 9.2e-15 83.6 72 58.3
HPP92_016288 Vanilla planifolia HOM05D003846 ORTHO05D004726 9.2e-15 83.6 72 58.3
Glyma.01G084700 Glycine max HOM05D003846 ORTHO05D004726 2.1e-14 82.4 72 58.3
unitig_21.g20429 Utricularia gibba HOM05D003846 ORTHO05D004726 2.7e-14 82.0 80 55.0
HPP92_016307 Vanilla planifolia HOM05D003846 ORTHO05D004726 2.7e-14 82.0 72 56.9
Glyma.07G089500 Glycine max HOM05D003846 ORTHO05D004726 6.0e-14 80.9 74 58.1
Glyma.09G187300 Glycine max HOM05D003846 ORTHO05D004726 6.0e-14 80.9 74 58.1
Lj2g0006290 Lotus japonicus HOM05D003846 ORTHO05D004726 6.0e-14 80.9 73 54.8
MSTRG.9269 Avicennia marina HOM05D003846 ORTHO05D004726 1.0e-13 80.1 73 57.5
Lalb_Chr14g0371301 Lupinus albus HOM05D003846 ORTHO05D004726 1.3e-13 79.7 73 54.8
Phvul.004G160300 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 1.7e-13 79.3 74 58.1
VMungo1215G1161 Vigna mungo HOM05D003846 ORTHO05D004726 1.7e-13 79.3 72 58.3
VMungo0464G1055 Vigna mungo HOM05D003846 ORTHO05D004726 3.0e-13 78.6 74 55.4
Medtr5g054770 Medicago truncatula HOM05D003846 ORTHO05D004726 6.6e-13 77.4 72 52.8
unitig_744.g24407 Utricularia gibba HOM05D003846 ORTHO05D004726 5.6e-12 74.3 80 53.8
arahy.Tifrunner.gnm1.ann1.5K2M2S Arachis hypogaea HOM05D003846 ORTHO05D004726 9.6e-12 73.6 73 49.3
arahy.Tifrunner.gnm1.ann1.5U1FHR Arachis hypogaea HOM05D003846 ORTHO05D004726 9.6e-12 73.6 73 49.3
Lsat_1_v5_gn_3_40660 Lactuca sativa HOM05D003846 ORTHO05D004726 1.6e-11 72.8 73 54.8
HanXRQChr06g0171111 Helianthus annuus HOM05D003846 ORTHO05D004726 2.8e-11 72.0 74 54.1
BcaB03g15443 Brassica carinata HOM05D003846 ORTHO05D004726 6.2e-11 70.9 53 64.2
Lj6A764T53 Lonicera japonica HOM05D003846 ORTHO05D004726 6.2e-11 70.9 51 62.7
Zm00001eb041630 Zea mays HOM05D003846 ORTHO05D004726 8.1e-11 70.5 75 48.0
ECA246G4193 Erigeron canadensis HOM05D003846 ORTHO05D004726 1.4e-10 69.7 73 49.3
AUR62035268 Chenopodium quinoa HOM05D003846 ORTHO05D004726 1.8e-10 69.3 52 63.5
Os08g0432500 Oryza sativa ssp. japonica HOM05D003846 ORTHO05D004726 6.8e-10 67.4 77 46.8
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 1.5e-09 66.2 52 53.8
BcaC03g14976 Brassica carinata HOM05D003846 ORTHO05D004726 2.0e-09 65.9 52 63.5
COL.COLO4_07882 Corchorus olitorius HOM05D000199 ORTHO05D000550 2.0e-09 65.9 44 63.6
TPR.G38292 Trifolium pratense HOM05D003846 ORTHO05D004726 2.0e-09 65.9 51 58.8
TPR.G9001 Trifolium pratense HOM05D003846 ORTHO05D004726 5.8e-09 64.3 66 54.5
C02p25100 Brassica napus HOM05D003846 ORTHO05D004726 9.9e-09 63.5 51 62.7
Medtr6g085050 Medicago truncatula HOM05D003846 ORTHO05D004726 1.3e-08 63.2 64 57.8
SalBow1G4777 Salvia bowleyana HOM05D003846 ORTHO05D004726 2.2e-08 62.4 51 58.8
Zm00001eb179570 Zea mays HOM05D003846 ORTHO05D004726 2.9e-08 62.0 77 42.9
Psat2g088560 Pisum sativum HOM05D003846 ORTHO05D004726 3.8e-08 61.6 51 54.9
Psat1g039320 Pisum sativum HOM05D003846 ORTHO05D004726 6.4e-08 60.8 64 54.7
Manes.14G098800 Manihot esculenta HOM05D003846 ORTHO05D004726 1.1e-07 60.1 34 79.4
CSS0028088 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 3.2e-07 58.5 34 73.5
Lj9A429T51 Lonicera japonica HOM05D003846 ORTHO05D004726 3.2e-07 58.5 50 54.0
Sabra10G0097700 Salix brachista HOM05D003846 ORTHO05D004726 5.4e-07 57.8 34 76.5
Actinidia39818 Actinidia chinensis HOM05D003846 ORTHO05D004726 7.1e-07 57.4 50 54.0
Potri.008G117800 Populus trichocarpa HOM05D003846 ORTHO05D004726 9.3e-07 57.0 34 73.5
SGA_v2.0_scaffold63G21786 Striga asiatica HOM05D003846 ORTHO05D004726 3.5e-06 55.1 35 68.6
Lsat_1_v5_gn_8_50200 Lactuca sativa HOM05D003846 ORTHO05D004726 4.6e-06 54.7 58 50.0
Lsat_1_v5_gn_5_18841 Lactuca sativa HOM05D003846 ORTHO05D020826 6.0e-06 54.3 54 53.7
Lsat_1_v5_gn_5_43841 Lactuca sativa HOM05D003846 ORTHO05D020826 6.0e-06 54.3 54 53.7
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 7.8e-06 53.9 79 38.0


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