Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.2e-230 802.0 407 100.0
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.3e-138 495.7 365 70.1
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.8e-136 490.0 365 66.6
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.8e-129 465.3 339 69.9
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.1e-128 464.2 366 65.3
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.0e-128 462.2 365 64.9
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.0e-126 457.6 367 62.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.3e-126 457.2 367 63.5
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.9e-126 456.1 367 63.5
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.4e-125 453.8 371 62.8
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.2e-124 450.7 365 64.1
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.0e-124 448.4 365 63.3
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.3e-123 447.2 365 62.5
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 2.3e-123 446.4 364 63.2
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.3e-121 440.7 356 63.8
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.3e-121 440.7 365 61.6
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 3.7e-121 439.1 365 63.0
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.8e-120 436.8 343 65.6
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 2.4e-120 436.4 363 61.7
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.2e-119 434.1 365 59.7
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.6e-119 433.0 365 59.7
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 7.7e-119 431.4 367 58.9
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 1.7e-118 430.3 366 59.3
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 3.8e-118 429.1 365 59.2
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 6.5e-118 428.3 365 59.7
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.1e-117 427.6 363 60.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.4e-117 427.2 339 64.6
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 6.1e-116 421.8 366 59.6
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 7.9e-116 421.4 366 59.0
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 5.7e-114 415.2 363 59.2
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.3e-113 414.1 366 57.4
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 2.8e-113 412.9 364 58.0
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 9.1e-112 407.9 365 57.0
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 4.5e-111 405.6 366 57.4
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.0e-110 404.4 367 56.7
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.0e-110 404.4 369 56.6
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.9e-110 402.9 369 56.1
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 3.8e-110 402.5 366 56.3
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 9.4e-109 397.9 379 55.1
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.0e-107 394.4 366 55.2
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.8e-107 393.7 369 55.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.1e-106 391.0 369 55.3
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 7.4e-106 388.3 338 60.4
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 2.2e-105 386.7 365 55.6
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 6.3e-105 385.2 364 54.9
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.1e-104 384.4 366 54.4
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 3.1e-104 382.9 363 54.8
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 4.1e-104 382.5 380 56.1
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 9.1e-104 381.3 366 52.7
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 1.2e-103 380.9 371 54.7
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.9e-103 378.6 324 59.9
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 5.5e-101 372.1 368 53.5
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 9.4e-101 371.3 363 54.5
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.2e-100 370.9 341 56.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.6e-100 370.5 319 60.8
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 8.0e-100 368.2 378 50.0
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 8.0e-100 368.2 365 52.3
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 9.7e-98 361.3 366 52.5
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.7e-97 360.5 364 52.2
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 3.7e-97 359.4 364 51.1
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.4e-96 357.5 363 51.8
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 2.4e-96 356.7 365 51.5
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 2.6e-95 353.2 364 51.1
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 5.9e-95 352.1 365 51.0
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 5.0e-94 349.0 258 69.4
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.5e-93 347.4 370 48.4
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.8e-91 340.5 390 46.7
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.3e-89 334.3 370 47.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 3.1e-88 329.7 250 67.6
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 5.3e-88 328.9 366 48.1
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.2e-87 327.8 330 51.5
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.6e-84 317.4 366 48.1
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.6e-84 317.4 370 51.4
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 4.7e-84 315.8 248 64.1
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 3.0e-83 313.2 366 47.5
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 3.0e-83 313.2 366 47.8
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.2e-82 311.2 367 46.9
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.0e-82 310.5 366 47.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 7.7e-79 298.5 364 45.3
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 3.8e-78 296.2 366 44.8
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 8.6e-78 295.0 476 39.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 2.1e-76 290.4 248 60.9
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 3.0e-75 286.6 367 43.6
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 4.0e-75 286.2 366 44.0
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.3e-73 281.2 366 43.7
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 4.5e-71 272.7 368 43.8
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.5e-69 267.7 366 41.8
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.2e-66 258.1 258 52.7
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.7e-65 253.1 237 59.1
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 8.6e-62 241.9 380 39.7
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.6e-55 221.1 363 37.7
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 5.2e-51 206.1 368 38.3
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 1.7e-49 201.1 345 39.1
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.7e-49 201.1 366 38.0
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.7e-46 191.0 247 43.3
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.7e-41 174.5 143 61.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.3e-37 159.8 189 48.7
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 1.6e-36 157.9 368 34.2
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.9e-35 152.5 119 62.2
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 4.6e-31 139.8 312 34.6
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 4.6e-31 139.8 306 35.6
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.3e-30 138.3 170 47.1
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.7e-30 137.9 116 58.6
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 7.3e-29 132.5 165 50.3
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 1.1e-24 118.6 114 48.2
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.9e-24 117.9 148 44.6
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.4e-24 117.5 411 27.5
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.0e-23 112.8 114 57.0
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.3e-20 105.1 97 53.6
Zm00001eb388110 Zea mays HOM05D007790 ORTHO05D009880 8.7e-06 55.8 33 72.7


User provided reference genes

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