Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 9.1e-106 387.1 225 100.0
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 3.5e-57 225.7 208 61.5
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 2.3e-48 196.4 201 62.2
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.5e-47 193.0 204 62.3
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 7.4e-47 191.4 208 58.2
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.3e-46 190.7 208 53.4
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 3.7e-46 189.1 221 50.2
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 1.4e-45 187.2 208 52.4
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 1.8e-45 186.8 178 58.4
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 4.0e-45 185.7 198 61.6
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.5e-44 183.7 172 59.3
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 2.0e-44 183.3 201 54.7
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.6e-44 183.0 207 49.3
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.4e-44 182.6 207 48.8
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 4.5e-44 182.2 204 51.5
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 1.0e-43 181.0 202 56.4
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.3e-43 180.6 207 49.8
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.1e-42 177.6 208 49.0
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 1.1e-42 177.6 202 57.9
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 4.2e-42 175.6 202 51.0
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.6e-41 173.7 200 50.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 6.0e-41 171.8 204 57.4
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.3e-40 170.6 208 48.1
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.7e-40 167.9 220 45.5
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 4.3e-39 165.6 208 54.8
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 8.2e-38 161.4 204 46.1
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-37 160.6 234 50.9
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 1.4e-37 160.6 209 56.0
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.4e-37 160.6 209 45.5
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 1.8e-37 160.2 209 54.1
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 2.4e-37 159.8 201 44.3
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 9.0e-37 157.9 201 44.3
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.5e-36 157.1 204 45.6
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 3.4e-36 156.0 199 45.7
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 3.4e-36 156.0 201 54.7
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 7.6e-36 154.8 204 45.1
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 2.9e-35 152.9 200 44.5
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.4e-34 150.6 175 50.3
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 4.2e-34 149.1 172 50.6
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 4.2e-34 149.1 172 50.6
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 2.1e-33 146.7 172 48.8
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 2.7e-33 146.4 172 50.6
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 2.3e-32 143.3 172 48.3
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 2.5e-31 139.8 244 46.7
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 3.3e-31 139.4 180 52.2
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 4.3e-31 139.0 172 44.8
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 3.1e-29 132.9 204 39.7
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 2.2e-27 126.7 172 54.7
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.9e-27 126.3 172 44.8
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 5.0e-27 125.6 204 39.2
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.1e-26 124.4 161 42.9
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 7.2e-26 121.7 161 43.5
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 9.4e-26 121.3 167 54.5
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 1.2e-25 120.9 161 42.9
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.6e-25 120.6 167 52.7
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 2.7e-25 119.8 169 44.4
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 3.6e-25 119.4 221 37.6
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 7.9e-25 118.2 161 52.8
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 7.9e-25 118.2 161 52.8
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.0e-24 117.9 174 46.0
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 1.0e-24 117.9 188 51.1
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 8.8e-24 114.8 205 41.5
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 1.5e-23 114.0 161 50.3
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 1.5e-23 114.0 161 50.3
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 1.5e-23 114.0 161 50.3
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.0e-23 113.6 161 49.1
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.0e-23 113.6 199 38.7
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 2.0e-23 113.6 203 35.0
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 3.7e-22 109.4 132 47.0
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 4.8e-22 109.0 178 36.5
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.4e-21 107.5 167 52.1
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.8e-21 107.1 203 39.4
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 6.9e-21 105.1 204 36.3
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-19 101.3 94 57.4
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.0e-19 101.3 94 57.4
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.0e-19 101.3 266 37.6
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.4e-16 90.9 105 47.6
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 7.4e-15 85.1 108 46.3
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 5.3e-13 79.0 101 62.4
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 5.3e-13 79.0 104 39.4
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 7.7e-12 75.1 105 41.0
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 5.0e-11 72.4 101 42.6
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.7e-09 66.6 74 47.3
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.7e-09 66.6 74 47.3
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 1.0e-08 64.7 74 55.4
ATR0317G063 Amborella trichopoda HOM05D007696 ORTHO05D009719 6.3e-06 55.5 88 37.5
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 8.2e-06 55.1 130 31.5


User provided reference genes

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