Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.9e-123 445.3 227 100.0
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.8e-54 215.3 194 66.0
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.3e-54 214.9 194 66.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 4.7e-49 198.7 195 61.5
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.9e-42 176.8 167 62.3
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.6e-41 173.7 184 57.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.0e-41 171.4 102 84.3
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 8.0e-41 171.4 193 57.0
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.0e-40 171.0 103 83.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.3e-40 169.9 110 79.1
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.3e-40 169.9 110 79.1
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.0e-40 169.1 160 66.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 5.2e-40 168.7 103 85.4
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.7e-40 168.3 195 54.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 8.8e-40 167.9 129 71.3
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 8.8e-40 167.9 108 80.6
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.1e-39 167.5 196 55.6
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.4e-39 165.6 182 57.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 4.4e-39 165.6 103 81.6
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 9.7e-39 164.5 103 80.6
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 9.7e-39 164.5 184 57.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.7e-38 163.7 133 65.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.7e-38 163.7 107 74.8
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.8e-38 162.9 203 51.2
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 3.7e-38 162.5 180 56.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 3.7e-38 162.5 181 55.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.8e-38 162.2 182 57.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 4.8e-38 162.2 124 68.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.8e-38 162.2 159 58.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 6.3e-38 161.8 113 73.5
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 6.3e-38 161.8 175 56.6
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 6.3e-38 161.8 118 71.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.4e-37 159.8 180 57.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.4e-37 159.8 181 54.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 4.1e-37 159.1 180 57.2
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 4.1e-37 159.1 103 76.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.1e-37 159.1 175 56.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 5.3e-37 158.7 141 62.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 7.0e-37 158.3 113 70.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.0e-37 158.3 169 56.2
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 9.1e-37 157.9 190 54.7
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.2e-36 157.5 111 71.2
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.2e-36 157.5 184 55.4
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.0e-36 156.8 180 56.7
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.6e-36 156.4 149 60.4
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 2.6e-36 156.4 152 59.2
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.6e-36 156.4 178 57.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.5e-36 156.0 191 50.8
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 4.5e-36 155.6 182 53.8
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.5e-36 155.6 227 48.9
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.9e-36 155.2 190 53.2
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 5.9e-36 155.2 184 53.3
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 7.7e-36 154.8 126 70.6
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.7e-36 154.8 192 52.1
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.3e-35 154.1 184 54.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.3e-35 154.1 185 54.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.7e-35 153.7 184 54.3
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.7e-35 153.7 191 49.7
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.7e-35 153.7 100 79.0
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.2e-35 153.3 182 51.6
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.9e-35 152.9 103 74.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.9e-35 152.9 101 73.3
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.8e-35 152.5 190 53.7
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 5.0e-35 152.1 189 50.3
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 5.0e-35 152.1 185 54.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 5.0e-35 152.1 162 56.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 6.5e-35 151.8 189 50.3
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 6.5e-35 151.8 178 54.5
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 8.5e-35 151.4 186 52.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 8.5e-35 151.4 182 51.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.1e-34 151.0 183 51.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.5e-34 150.6 150 58.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.9e-34 150.2 193 52.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.5e-34 149.8 193 49.2
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 2.5e-34 149.8 186 52.2
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.5e-34 149.8 156 56.4
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.2e-34 149.4 188 50.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.2e-34 149.1 184 52.2
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.5e-34 148.7 109 71.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 7.2e-34 148.3 184 51.6
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 7.2e-34 148.3 185 54.6
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 9.4e-34 147.9 184 51.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 9.4e-34 147.9 189 48.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 9.4e-34 147.9 185 47.0
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-33 147.5 88 85.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.2e-33 147.5 113 64.6
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.6e-33 147.1 188 51.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.6e-33 147.1 118 64.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.6e-33 147.1 88 85.2
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.1e-33 146.7 186 51.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.1e-33 146.7 186 51.6
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.7e-33 145.6 96 78.1
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.3e-32 143.3 96 77.1
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.5e-31 140.6 100 70.0
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.5e-31 140.6 101 72.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 2.0e-31 140.2 166 53.6
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.6e-31 139.8 108 63.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.3e-30 137.5 81 86.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.4e-29 133.3 100 69.0
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 2.4e-29 133.3 168 51.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.0e-28 130.2 96 65.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 5.9e-28 128.6 99 67.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.7e-27 127.1 122 60.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 5.0e-27 125.6 169 50.3
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.2e-25 120.9 212 41.5
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.7e-23 112.1 64 85.9
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 9.8e-23 111.3 63 85.7
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.7e-22 110.5 64 84.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.7e-22 110.5 111 48.6
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 4.9e-22 109.0 111 47.7
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.5e-18 97.4 184 40.8
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.9e-18 97.1 110 50.9
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 6.4e-14 82.0 90 53.3
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 8.3e-14 81.6 89 48.3
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 6.6e-11 72.0 93 40.9
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 6.2e-09 65.5 41 78.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.4e-07 59.7 80 38.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 3.4e-07 59.7 41 73.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.7e-06 56.2 124 40.3


User provided reference genes

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