Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23603 Nelumbo nucifera HOM05D017299 ORTHO05D009802 1.1e-68 263.5 168 100.0
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 1.0e-32 144.1 166 65.7
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 5.0e-16 88.6 172 39.0
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.4e-13 80.5 174 39.7
TAR629G0246 Trochodendron aralioides HOM05D008563 ORTHO05D009802 3.0e-13 79.3 158 50.0
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 5.2e-13 78.6 168 35.7
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 6.8e-13 78.2 179 45.8
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 2.9e-11 72.8 157 49.7
PSO478G2273 Papaver somniferum HOM05D042328 ORTHO05D009956 1.1e-10 70.9 165 36.4
QL03p047692 Quercus lobata HOM05D017299 ORTHO05D013371 1.8e-10 70.1 160 41.2
CiPaw.05G119800 Carya illinoinensis HOM05D017299 ORTHO05D013371 3.2e-10 69.3 168 33.9
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 5.4e-10 68.6 171 34.5
Haze_11837 Corylus avellana HOM05D017299 ORTHO05D013371 7.0e-10 68.2 172 37.8
PSO017G1525 Papaver somniferum HOM05D042328 ORTHO05D009956 7.0e-10 68.2 165 35.2
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.2e-09 67.4 172 40.7
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.2e-09 67.4 172 40.7
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.6e-09 67.0 172 37.8
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 2.0e-09 66.6 170 43.5
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 3.5e-09 65.9 172 39.0
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 4.6e-09 65.5 173 38.2
TAR374G0646 Trochodendron aralioides HOM05D008563 ORTHO05D009802 4.6e-09 65.5 142 59.2
Aqoxy3G00592 Aquilegia oxysepala HOM05D042328 ORTHO05D009802 1.3e-08 63.9 162 38.9
Potri.010G134800 Populus trichocarpa HOM05D018804 ORTHO05D013371 1.3e-08 63.9 164 36.6
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 2.3e-08 63.2 164 36.6
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 2.3e-08 63.2 161 31.7
Cfa008825 Carpinus fangiana HOM05D017299 ORTHO05D013371 3.9e-08 62.4 173 38.7
CiPaw.06G096300 Carya illinoinensis HOM05D017299 ORTHO05D013371 6.6e-08 61.6 162 30.2
CiPaw.16G081000 Carya illinoinensis HOM05D008563 ORTHO05D009802 8.6e-08 61.2 176 48.3
Hma1.2p1_0744F.1_g211700 Hydrangea macrophylla HOM05D008563 ORTHO05D009802 8.6e-08 61.2 168 38.1
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 8.6e-08 61.2 161 32.3
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 1.1e-07 60.8 126 38.9
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 1.5e-07 60.5 169 34.3
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 4.3e-07 58.9 139 36.7
ClCG06G015330 Citrullus lanatus HOM05D008563 ORTHO05D009802 7.3e-07 58.2 168 42.3
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 7.3e-07 58.2 168 31.5
Prupe.1G298800 Prunus persica HOM05D014692 ORTHO05D014734 1.2e-06 57.4 162 36.4
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 1.6e-06 57.0 150 37.3
Thecc.02G317900 Theobroma cacao HOM05D018013 ORTHO05D013371 1.6e-06 57.0 169 38.5
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 2.1e-06 56.6 155 33.5
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 2.8e-06 56.2 128 32.8
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 2.8e-06 56.2 151 31.8
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 3.6e-06 55.8 151 31.8
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 3.6e-06 55.8 159 35.8
Cpa.g.sc53.8 Carica papaya HOM05D017299 ORTHO05D013371 4.7e-06 55.5 161 38.5
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 6.2e-06 55.1 156 33.3
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 8.0e-06 54.7 171 36.8


User provided reference genes

Program Settings