Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.2e-244 849.4 430 100.0
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 9.6e-205 716.8 431 85.2
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.7e-204 714.9 431 85.2
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.2e-201 705.7 434 82.3
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 3.8e-201 704.9 431 84.2
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 8.7e-198 693.7 414 84.8
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 9.7e-197 690.3 424 83.0
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.3e-196 689.9 414 84.1
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.4e-195 686.4 431 81.4
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.4e-195 686.4 417 83.9
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 1.8e-195 686.0 396 86.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.8e-195 686.0 383 89.3
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.4e-195 685.6 424 82.3
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 3.1e-195 685.3 433 81.1
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.0e-194 682.6 436 81.0
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.2e-193 679.1 431 80.3
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 6.5e-193 677.6 411 82.7
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 8.5e-193 677.2 431 79.6
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 8.5e-193 677.2 419 81.6
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.9e-192 676.0 431 80.3
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 4.2e-192 674.9 414 83.1
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 2.7e-191 672.2 419 81.1
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 4.6e-191 671.4 431 79.6
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 4.6e-191 671.4 431 79.6
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 4.6e-191 671.4 430 79.8
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.0e-190 670.2 420 81.0
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 1.0e-190 670.2 433 79.9
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-190 670.2 430 79.8
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 1.4e-190 669.8 423 80.9
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 2.3e-190 669.1 413 82.8
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 5.1e-190 667.9 430 79.5
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.7e-190 667.5 383 86.7
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 6.7e-190 667.5 430 79.5
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.1e-189 666.8 431 79.8
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 1.1e-189 666.8 383 85.9
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.1e-189 666.8 413 81.8
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.1e-189 666.8 431 79.8
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.0e-189 666.0 431 78.9
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 2.5e-189 665.6 430 79.3
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 2.5e-189 665.6 430 79.3
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.5e-189 665.6 394 85.3
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 4.3e-189 664.8 408 83.3
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 5.7e-189 664.5 430 79.8
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 7.4e-189 664.1 431 79.6
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.3e-188 663.3 370 88.6
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-188 663.3 414 81.6
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 1.7e-188 662.9 408 82.8
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 2.2e-188 662.5 424 80.7
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 3.1e-187 658.7 457 75.3
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.1e-187 658.3 384 84.9
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 4.1e-187 658.3 407 81.8
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 5.3e-187 657.9 384 84.9
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.5e-186 656.4 425 79.3
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 3.4e-186 655.2 432 78.7
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 4.5e-186 654.8 403 81.4
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 7.7e-186 654.1 432 78.2
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 7.7e-186 654.1 431 78.4
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 2.2e-185 652.5 407 81.6
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 6.5e-185 651.0 371 87.1
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 1.1e-184 650.2 412 80.3
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.1e-184 650.2 424 78.8
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.9e-184 649.4 414 80.0
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.2e-184 648.3 430 77.9
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 9.4e-184 647.1 433 77.6
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 2.7e-183 645.6 426 77.9
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 2.7e-183 645.6 440 76.1
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 3.0e-182 642.1 431 76.8
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 8.8e-182 640.6 434 77.6
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.1e-181 640.2 437 76.9
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.6e-181 639.0 431 76.6
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 4.4e-181 638.3 429 76.9
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.4e-181 638.3 435 76.8
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 7.4e-181 637.5 429 76.9
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 9.7e-181 637.1 412 80.1
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.7e-180 636.3 442 75.3
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 2.2e-180 636.0 343 90.1
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 2.8e-180 635.6 427 78.0
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 4.8e-180 634.8 425 77.6
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.1e-179 633.6 430 76.0
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 3.1e-179 632.1 427 76.8
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.2e-178 630.2 413 77.7
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 1.2e-178 630.2 434 76.5
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 4.5e-178 628.2 430 74.0
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 4.5e-178 628.2 434 76.5
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 7.7e-178 627.5 433 75.5
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 7.7e-178 627.5 432 75.9
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 7.7e-178 627.5 431 76.6
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 7.7e-178 627.5 424 77.4
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 2.2e-177 625.9 425 77.4
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 4.7e-175 618.2 426 75.4
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 6.1e-175 617.8 425 75.3
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.1e-175 617.8 413 76.3
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 6.1e-175 617.8 422 75.8
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 1.8e-174 616.3 329 90.9
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 3.0e-174 615.5 381 79.8
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 3.0e-174 615.5 422 74.9
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.7e-174 614.4 413 76.0
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 2.0e-173 612.8 401 78.3
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 2.6e-173 612.5 411 75.9
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.6e-173 612.5 411 75.9
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 2.6e-173 612.5 413 76.0
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.2e-172 609.4 431 73.1
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 4.8e-172 608.2 380 79.5
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.1e-171 607.1 410 75.6
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.0e-170 602.8 395 75.9
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 2.6e-170 602.4 363 81.8
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.1e-168 597.0 369 78.9
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 4.7e-167 591.7 414 75.6
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 5.7e-165 584.7 315 89.2
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.3e-164 583.6 392 74.0
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 2.7e-162 575.9 417 73.9
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.5e-162 575.1 417 73.9
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.9e-160 569.7 365 80.5
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 1.4e-158 563.5 385 75.8
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 8.3e-156 554.3 326 84.4
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.8e-148 529.3 371 76.8
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 2.0e-146 523.1 283 90.1
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.0e-142 508.8 428 63.3
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.4e-139 499.6 352 72.2
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.2e-139 499.2 436 61.2
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.6e-138 496.9 333 78.4
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 3.0e-137 492.7 350 71.1
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 3.9e-137 492.3 352 71.6
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 4.3e-136 488.8 317 80.4
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 9.5e-136 487.6 345 71.6
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.7e-135 485.3 329 73.3
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 2.6e-133 479.6 343 71.1
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 2.6e-133 479.6 343 71.1
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 2.6e-133 479.6 343 71.1
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 4.4e-133 478.8 345 71.0
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 2.9e-132 476.1 345 70.4
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 6.8e-126 454.9 458 57.6
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.6e-125 453.0 321 72.9
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.3e-121 440.7 366 60.7
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.8e-119 433.0 327 73.1
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 2.8e-119 433.0 350 60.3
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 7.6e-117 424.9 312 67.9
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.6e-113 411.8 282 72.3
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 7.6e-109 398.3 319 66.8
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 4.2e-107 392.5 224 87.1
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.0e-89 334.7 296 65.5
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 3.7e-87 326.2 216 76.4
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.6e-74 282.7 234 64.5
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.0e-73 281.6 193 74.6
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 1.7e-68 264.2 249 58.2
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.4e-62 243.8 183 69.4
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.5e-61 241.1 276 48.6
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.9e-59 234.2 183 67.2
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 8.0e-58 228.8 149 73.8
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.5e-51 208.0 179 61.5
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 9.4e-51 205.3 173 63.6
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 6.8e-49 199.1 303 38.6
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.1e-46 191.8 100 95.0
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.1e-46 189.9 148 68.2
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 3.5e-45 186.8 179 58.7
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-44 185.3 101 84.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-43 181.8 104 84.6
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 9.4e-43 178.7 101 81.2
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.8e-41 174.5 172 58.1
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 4.9e-39 166.4 100 78.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.9e-35 154.5 77 89.6
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 1.2e-34 151.8 122 65.6
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 1.6e-34 151.4 212 39.2
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.1e-34 151.0 135 61.5
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 6.8e-33 146.0 76 85.5
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 5.0e-28 129.8 72 88.9
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 3.7e-23 113.6 74 78.4
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.2e-21 108.6 182 43.4
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.3e-20 104.4 106 54.7
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.6e-13 81.6 78 57.7
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.6e-13 81.6 78 57.7
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 3.0e-12 77.4 49 75.5
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.9e-12 77.0 53 69.8
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.1e-09 68.9 87 51.7
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.3e-09 67.8 36 88.9
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 3.4e-08 63.9 45 71.1
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 4.1e-06 57.0 44 75.0


User provided reference genes

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