Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 4.7e-115 417.9 219 100.0
Nn3g17567 Nelumbo nucifera HOM05D011223 ORTHO05D010778 1.0e-37 161.0 242 48.3
Dinv36819 Davidia involucrata HOM05D011223 ORTHO05D016556 1.4e-18 97.4 227 36.1
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 2.6e-12 76.6 235 32.8
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 3.4e-12 76.3 228 32.0
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 4.4e-12 75.9 229 34.9
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 6.3e-11 72.0 223 36.3
Manes.06G080101 Manihot esculenta HOM05D014956 ORTHO05D016159 1.1e-10 71.2 213 33.8
CSS0003820 Camellia sinensis var. sinensis HOM05D011223 ORTHO05D010778 4.1e-10 69.3 224 33.9
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 4.5e-09 65.9 247 33.6
Nitab4.5_0000646g0300 Nicotiana tabacum HOM05D014956 ORTHO05D016159 7.8e-09 65.1 221 29.4
Potri.004G112600 Populus trichocarpa HOM05D011223 ORTHO05D010778 2.3e-08 63.5 225 31.1
Solyc03g114700.2 Solanum lycopersicum HOM05D014956 ORTHO05D016159 2.3e-08 63.5 224 29.5
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 8.6e-08 61.6 229 31.9
PSO017G6836 Papaver somniferum HOM05D036605 ORTHO05D016556 8.6e-08 61.6 219 28.8
Sabra04G0072200 Salix brachista HOM05D011223 ORTHO05D010778 1.5e-07 60.8 243 30.5
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 1.5e-07 60.8 220 28.2
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 2.5e-07 60.1 270 27.8
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 4.3e-07 59.3 189 32.8
CiPaw.04G051300 Carya illinoinensis HOM05D011223 ORTHO05D010778 5.6e-07 58.9 242 30.2
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 5.6e-07 58.9 83 41.0
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 5.6e-07 58.9 217 33.2
TAR622G0458 Trochodendron aralioides HOM05D034965 ORTHO05D016556 1.6e-06 57.4 77 45.5
PSO478G1594 Papaver somniferum HOM05D036605 ORTHO05D016556 3.6e-06 56.2 218 27.5
Thecc.03G110400 Theobroma cacao HOM05D051152 ORTHO05D025136 6.1e-06 55.5 173 31.8


User provided reference genes

Program Settings