Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23501 Nelumbo nucifera HOM05D000843 ORTHO05D000698 1.8e-18 94.7 42 100.0
Nn2g14615 Nelumbo nucifera HOM05D000843 ORTHO05D000698 1.3e-13 78.6 42 85.7
Nn6g33881 Nelumbo nucifera HOM05D000843 ORTHO05D000698 9.3e-12 72.4 42 83.3
Nn2g14408 Nelumbo nucifera HOM05D000843 ORTHO05D000698 3.9e-10 67.0 42 73.8
TAR623G1014 Trochodendron aralioides HOM05D000843 ORTHO05D000698 5.1e-10 66.6 39 76.9
CiPaw.13G048000 Carya illinoinensis HOM05D000843 ORTHO05D000698 1.6e-08 61.6 39 64.1
Atru.chr12.1125 Acer truncatum HOM05D000843 ORTHO05D000698 2.8e-08 60.8 42 66.7
Oeu058666.1 Olea europaea HOM05D000843 ORTHO05D000698 6.2e-08 59.7 39 71.8
Cfa010435 Carpinus fangiana HOM05D000843 ORTHO05D000698 1.8e-07 58.2 39 61.5
Ciclev10000608m.g Citrus clementina HOM05D000843 ORTHO05D000698 2.4e-07 57.8 34 76.5
Potri.008G011300 Populus trichocarpa HOM05D000843 ORTHO05D000698 2.4e-07 57.8 33 72.7
CSS0026723 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 3.1e-07 57.4 36 66.7
CSS0042440 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 3.1e-07 57.4 36 66.7
ClCG08G008610 Citrullus lanatus HOM05D000843 ORTHO05D000698 3.1e-07 57.4 34 67.6
MELO3C019931.2 Cucumis melo HOM05D000843 ORTHO05D000698 3.1e-07 57.4 34 67.6
PSO675G4150 Papaver somniferum HOM05D000843 ORTHO05D000698 3.1e-07 57.4 34 76.5
PSO017G6549 Papaver somniferum HOM05D000843 ORTHO05D000698 5.3e-07 56.6 34 73.5
TAR369G0943 Trochodendron aralioides HOM05D000843 ORTHO05D000698 5.3e-07 56.6 38 65.8
Sed0007475 Sechium edule HOM05D000843 ORTHO05D000698 9.0e-07 55.8 34 61.8
CsaV3_6G004610 Cucumis sativus L. HOM05D000843 ORTHO05D000698 1.2e-06 55.5 34 67.6
EL10Ac4g08800 Beta vulgaris HOM05D000843 ORTHO05D000698 2.6e-06 54.3 39 61.5
AUR62041277 Chenopodium quinoa HOM05D000843 ORTHO05D000698 2.6e-06 54.3 39 59.0
CiPaw.14G037900 Carya illinoinensis HOM05D000843 ORTHO05D000698 3.4e-06 53.9 42 57.1
CANSAT56G3644 Cannabis sativa HOM05D000843 ORTHO05D000698 4.5e-06 53.5 41 51.2
Sed0011376 Sechium edule HOM05D000843 ORTHO05D000698 5.8e-06 53.1 33 66.7
Sc09g0004940 Simmondsia chinensis HOM05D000843 ORTHO05D000698 5.8e-06 53.1 36 55.6
Haze_03389 Corylus avellana HOM05D000843 ORTHO05D000698 1.0e-05 52.4 37 59.5
Potri.010G247500 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.0e-05 52.4 33 66.7


User provided reference genes

Program Settings