Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 6.4e-58 227.6 155 100.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 1.0e-47 193.7 152 75.7
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.1e-46 190.3 151 72.8
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 6.2e-45 184.5 150 71.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 8.1e-45 184.1 154 83.1
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 1.4e-44 183.3 150 69.3
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.8e-44 183.0 155 76.8
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.4e-44 182.6 152 69.1
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 5.3e-44 181.4 147 82.3
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.6e-43 179.1 151 69.5
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 2.6e-43 179.1 156 68.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 3.4e-43 178.7 156 68.6
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 4.4e-43 178.3 156 67.9
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.4e-43 178.3 147 70.1
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 5.8e-43 177.9 149 69.8
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 5.8e-43 177.9 150 69.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 7.6e-43 177.6 156 67.3
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 9.9e-43 177.2 149 71.8
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.3e-42 176.8 149 69.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.7e-42 176.4 147 67.3
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.7e-42 176.4 151 68.2
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.2e-42 176.0 158 67.1
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.9e-42 175.6 152 68.4
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 3.8e-42 175.3 147 67.3
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 3.8e-42 175.3 156 66.7
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 6.4e-42 174.5 143 71.3
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 8.4e-42 174.1 149 67.8
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 8.4e-42 174.1 151 66.9
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 8.4e-42 174.1 147 67.3
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.4e-41 173.3 157 65.6
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.4e-41 173.3 147 69.4
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 1.9e-41 172.9 147 67.3
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.2e-41 171.8 146 68.5
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 7.1e-41 171.0 151 66.9
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 9.3e-41 170.6 149 67.1
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 9.3e-41 170.6 149 67.1
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 9.3e-41 170.6 146 68.5
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.3e-41 170.6 146 68.5
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.3e-41 170.6 146 68.5
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 9.3e-41 170.6 152 67.8
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.2e-40 170.2 155 65.2
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 2.1e-40 169.5 151 63.6
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.1e-40 169.5 154 63.0
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.1e-40 169.5 177 61.6
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.7e-40 169.1 152 80.3
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.7e-40 169.1 146 67.8
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.7e-40 169.1 146 67.8
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.7e-40 169.1 154 66.2
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 4.6e-40 168.3 154 63.6
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 6.0e-40 167.9 147 66.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.8e-40 167.5 157 64.3
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.0e-39 167.2 146 82.9
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.0e-39 167.2 148 66.2
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.3e-39 166.8 147 64.6
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.7e-39 166.4 155 64.5
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.7e-39 166.4 147 65.3
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.7e-39 166.4 147 65.3
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.7e-39 166.4 149 64.4
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.6e-39 164.5 151 64.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.6e-39 164.5 151 64.2
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.5e-38 163.3 147 64.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.9e-38 162.9 152 65.8
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.9e-38 162.9 147 64.6
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 2.5e-38 162.5 152 61.2
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 4.3e-38 161.8 148 63.5
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 4.3e-38 161.8 155 61.9
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 9.6e-38 160.6 139 64.7
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.3e-37 160.2 148 63.5
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-37 160.2 148 62.8
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.3e-37 160.2 148 63.5
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.3e-37 160.2 148 63.5
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 1.6e-37 159.8 148 62.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.6e-37 159.8 148 63.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.1e-37 159.5 148 62.8
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 2.1e-37 159.5 148 62.8
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.1e-37 159.5 145 63.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.8e-37 159.1 148 62.8
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.8e-37 159.1 148 62.2
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.8e-37 159.1 147 63.9
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 4.8e-37 158.3 148 63.5
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 6.2e-37 157.9 142 63.4
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 6.2e-37 157.9 148 62.2
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.1e-36 157.1 155 61.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.8e-36 156.4 148 62.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.8e-36 156.4 148 60.8
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 2.4e-36 156.0 154 58.4
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 3.1e-36 155.6 147 63.3
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 5.3e-36 154.8 149 76.5
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 5.3e-36 154.8 127 71.7
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.2e-35 153.7 148 62.2
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.3e-34 150.2 147 59.2
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.7e-34 149.8 144 58.3
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 3.8e-34 148.7 97 85.6
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.4e-34 147.5 157 73.2
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.9e-33 146.4 97 84.5
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 5.4e-33 144.8 155 72.3
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 4.6e-32 141.7 139 58.3
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 3.9e-31 138.7 148 60.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 3.9e-31 138.7 148 58.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 5.1e-31 138.3 102 76.5
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 6.7e-31 137.9 149 57.7
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.6e-29 133.3 97 79.4
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.7e-29 132.1 155 68.4
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 6.2e-29 131.3 97 77.3
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.4e-28 130.2 137 54.0
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 2.4e-28 129.4 97 73.2
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.0e-27 126.3 90 78.9
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 7.6e-27 124.4 142 54.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.3e-26 123.6 152 67.8
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 2.2e-26 122.9 221 41.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.2e-25 119.0 155 64.5
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 3.2e-25 119.0 155 64.5
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 3.2e-25 119.0 89 70.8
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.5e-25 118.2 149 53.0
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 7.1e-25 117.9 96 67.7
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.2e-24 117.1 141 45.4
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.6e-24 116.7 89 70.8
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.3e-23 113.6 136 45.6
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.1e-21 106.3 130 69.2
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 5.8e-19 98.2 138 39.9
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.2e-17 92.4 92 62.0
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 6.3e-13 78.2 81 59.3
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.5e-11 73.6 127 59.1
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 7.7e-11 71.2 53 66.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 8.5e-10 67.8 47 74.5
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.1e-06 57.4 54 48.1


User provided reference genes

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