Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 4.5e-224 781.2 467 100.0
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 3.4e-38 163.7 278 39.9
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 7.1e-36 156.0 273 41.8
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 3.9e-34 150.2 233 45.5
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 6.7e-34 149.4 280 38.9
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 1.5e-33 148.3 282 39.0
TAR371G0637 Trochodendron aralioides HOM05D005710 ORTHO05D004657 4.3e-33 146.7 136 61.0
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 2.1e-32 144.4 262 36.3
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.0e-31 140.2 281 38.1
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 5.3e-31 139.8 280 35.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 5.3e-31 139.8 279 37.6
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 1.5e-30 138.3 287 37.3
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 1.7e-29 134.8 286 37.1
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.4e-28 131.7 267 37.8
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 4.2e-28 130.2 290 36.6
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 3.5e-27 127.1 288 34.4
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 7.9e-27 125.9 282 34.4
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 5.1e-26 123.2 275 36.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 8.7e-26 122.5 287 35.2
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 1.1e-25 122.1 261 38.3
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 1.9e-25 121.3 280 36.1
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 4.3e-25 120.2 270 33.3
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 5.7e-25 119.8 329 35.6
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.3e-24 118.6 276 33.7
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 1.6e-24 118.2 286 36.0
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 2.8e-24 117.5 282 33.0
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 3.1e-23 114.0 275 34.9
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 2.6e-22 110.9 334 34.1
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.0e-21 109.0 276 31.9
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 1.3e-21 108.6 262 35.9
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 1.9e-20 104.8 269 32.7
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 2.7e-19 100.9 279 34.1
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 7.9e-19 99.4 207 38.2
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 2.3e-18 97.8 284 31.0
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 8.7e-18 95.9 269 30.5
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.5e-17 95.1 216 35.6
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 2.5e-17 94.4 272 31.2
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.4e-17 92.8 289 32.2
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 9.7e-17 92.4 259 31.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 1.1e-15 89.0 211 39.3
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.8e-15 88.2 274 33.2
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 2.4e-15 87.8 271 31.7
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 9.0e-15 85.9 173 37.6
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.2e-14 85.5 209 38.8
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 1.2e-14 85.5 280 32.1
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 1.2e-14 85.5 277 30.3
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 2.0e-14 84.7 279 28.7
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 2.6e-14 84.3 170 33.5
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 7.7e-14 82.8 408 27.2
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.7e-14 82.8 219 37.0
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 3.8e-13 80.5 267 30.3
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 6.5e-13 79.7 204 34.8
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 9.4e-12 75.9 271 33.6
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 2.7e-11 74.3 276 28.6
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.6e-11 73.6 137 40.9
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 1.0e-10 72.4 278 27.3
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 2.3e-10 71.2 252 29.8
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 1.5e-09 68.6 283 29.0
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 2.0e-09 68.2 258 29.1
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 4.3e-09 67.0 263 27.0
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 7.4e-09 66.2 249 30.9
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 7.4e-09 66.2 268 28.7
Ca_06819_v3 Cicer arietinum L. HOM05D005710 ORTHO05D004657 9.7e-09 65.9 260 27.7
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 2.2e-08 64.7 263 26.2
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 2.8e-08 64.3 282 28.0
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 3.7e-08 63.9 253 27.7
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 4.8e-08 63.5 255 29.8
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 8.2e-08 62.8 256 28.5
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 2.4e-07 61.2 231 30.7
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 3.1e-07 60.8 255 27.1
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 3.1e-07 60.8 310 28.7
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 3.1e-07 60.8 383 24.8
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 4.1e-07 60.5 297 26.6
MBI12_g24383_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 6.9e-07 59.7 92 31.5
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 9.1e-07 59.3 194 29.9
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 9.1e-07 59.3 340 25.0
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 1.2e-06 58.9 272 25.0
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 2.0e-06 58.2 295 25.4
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 3.4e-06 57.4 279 28.0
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 3.4e-06 57.4 234 29.9
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 4.5e-06 57.0 257 26.8
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 5.9e-06 56.6 318 23.9


User provided reference genes

Program Settings