Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 5.4e-223 777.3 386 100.0
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.0e-197 691.8 362 93.6
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 6.6e-197 690.6 362 93.1
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.9e-196 689.1 362 92.8
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.3e-196 688.3 362 92.8
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.1e-195 685.6 362 92.5
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 8.1e-195 683.7 362 92.5
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.1e-194 683.3 362 92.3
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.1e-194 683.3 362 91.7
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.4e-194 682.2 361 91.7
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 4.0e-194 681.4 362 91.4
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 4.0e-194 681.4 362 91.4
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 4.0e-194 681.4 362 92.0
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 9.0e-194 680.2 361 91.4
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 9.0e-194 680.2 361 91.7
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.5e-193 679.5 362 91.7
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 2.0e-193 679.1 362 92.0
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.0e-193 679.1 361 92.0
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 2.6e-193 678.7 362 91.4
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 4.5e-193 677.9 361 90.9
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 9.9e-193 676.8 362 90.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.3e-192 676.4 362 91.4
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.3e-192 676.4 362 91.4
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.3e-192 676.4 362 91.4
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.3e-192 676.4 361 91.1
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.3e-192 676.4 362 91.4
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.9e-192 675.2 359 91.9
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 4.9e-192 674.5 362 90.9
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.9e-192 674.5 362 91.2
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.9e-192 674.5 374 88.8
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.9e-192 674.5 380 88.2
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.9e-192 674.5 380 88.2
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 6.4e-192 674.1 361 90.3
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.9e-191 672.5 362 89.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.9e-191 672.5 357 91.6
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 2.4e-191 672.2 362 90.6
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 3.2e-191 671.8 362 91.7
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.2e-191 671.4 362 90.1
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.2e-190 669.8 361 90.3
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.2e-190 669.8 362 90.1
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.1e-190 669.1 362 90.3
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.5e-190 668.3 362 90.1
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 4.6e-190 667.9 361 89.2
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.6e-190 667.9 361 89.8
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.8e-189 666.0 358 90.5
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.8e-189 666.0 362 89.8
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.3e-189 665.6 361 88.9
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.0e-189 665.2 387 85.8
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 6.7e-189 664.1 358 89.4
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 8.7e-189 663.7 362 89.5
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.5e-188 662.9 361 88.9
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.5e-188 662.1 360 89.2
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 5.6e-188 661.0 362 88.7
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 5.6e-188 661.0 362 87.6
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.3e-187 659.8 362 89.5
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.3e-187 659.8 362 89.0
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.3e-187 659.8 361 88.6
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 1.6e-187 659.4 362 89.5
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 6.2e-187 657.5 361 88.6
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 6.2e-187 657.5 362 89.2
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 8.1e-187 657.1 358 89.4
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 8.1e-187 657.1 362 88.7
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 1.8e-186 656.0 365 88.2
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.8e-186 656.0 362 87.8
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-186 655.6 362 88.4
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.1e-186 655.2 362 88.7
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 4.0e-186 654.8 362 88.1
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.2e-185 653.3 362 88.1
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.2e-185 653.3 360 88.6
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.0e-185 652.5 362 87.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.0e-185 652.5 362 87.3
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.6e-185 652.1 358 89.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.6e-185 652.1 358 88.0
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 3.4e-185 651.7 362 86.7
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.4e-185 651.7 362 87.6
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.7e-184 649.4 363 87.9
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 2.2e-184 649.0 362 87.8
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 2.9e-184 648.7 363 87.9
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.4e-183 646.4 362 87.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 9.3e-183 643.7 377 85.4
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.3e-181 639.8 366 85.0
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 6.7e-181 637.5 356 86.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.5e-180 636.3 362 86.2
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 6.2e-179 630.9 361 86.1
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.1e-178 630.2 332 92.2
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 7.4e-172 607.4 332 88.3
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 2.1e-171 605.9 366 83.3
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.2e-169 600.1 369 82.1
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 5.9e-169 597.8 362 82.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 9.3e-167 590.5 360 83.9
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.6e-166 588.2 362 82.0
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 3.9e-165 585.1 358 77.7
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 7.2e-151 537.7 354 72.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.8e-149 533.1 359 72.4
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.3e-149 532.7 353 72.0
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.4e-146 523.5 279 91.0
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.3e-144 516.9 364 75.3
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 6.1e-142 508.1 362 73.2
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 3.0e-141 505.8 350 69.1
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 8.2e-139 497.7 262 92.0
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 5.3e-138 495.0 263 90.9
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 7.2e-135 484.6 263 89.4
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.8e-130 469.9 332 74.1
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.4e-125 453.8 374 61.5
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 3.0e-125 452.6 243 88.5
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.3e-119 432.6 308 72.4
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-115 420.2 215 93.5
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.7e-115 420.2 215 93.5
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.8e-114 416.8 220 92.3
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.3e-112 409.8 322 68.0
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.6e-112 407.9 225 87.1
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 7.5e-100 368.2 387 48.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-96 357.1 242 77.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 3.5e-65 253.1 294 44.6
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 2.2e-59 233.8 313 42.5
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.3e-54 215.7 389 36.2
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.1e-50 204.9 117 85.5
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.7e-48 195.7 323 36.2
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.3e-46 191.4 102 89.2
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.7e-46 191.0 370 34.6
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.4e-45 188.0 100 93.0
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 2.9e-43 180.3 336 34.5
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 1.6e-41 174.5 337 32.3
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 7.4e-39 165.6 96 87.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.1e-21 106.7 51 88.2
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 9.1e-21 105.5 56 85.7
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 2.2e-19 100.9 57 82.5
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.7e-14 84.7 45 97.8
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 3.0e-08 63.9 38 84.2
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 5.2e-08 63.2 163 27.0
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 6.8e-08 62.8 42 76.2


User provided reference genes

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