Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.7e-50 203.4 200 100.0
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 8.0e-29 131.3 120 61.7
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 5.2e-28 128.6 121 58.7
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 6.8e-28 128.3 123 68.3
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 3.4e-27 125.9 117 58.1
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 4.4e-27 125.6 123 57.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 5.8e-27 125.2 123 70.7
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.9e-26 122.9 119 72.3
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 8.3e-26 121.3 121 66.9
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.4e-25 120.6 110 60.9
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.4e-25 120.6 120 67.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.4e-25 120.6 115 77.4
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.9e-25 120.2 116 57.8
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 2.4e-25 119.8 110 70.0
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 4.1e-25 119.0 123 68.3
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 4.1e-25 119.0 110 70.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 7.0e-25 118.2 123 68.3
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 9.2e-25 117.9 112 58.9
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.2e-24 117.5 107 68.2
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.0e-24 116.7 116 56.0
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.0e-24 116.7 115 53.9
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-24 115.9 122 53.3
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 7.8e-24 114.8 121 54.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 7.8e-24 114.8 119 53.8
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.3e-23 113.2 123 65.9
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.0e-23 112.8 121 55.4
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.0e-23 112.8 124 66.9
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 3.9e-23 112.5 123 65.9
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 3.9e-23 112.5 117 58.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.9e-23 112.5 123 61.0
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 5.0e-23 112.1 121 54.5
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 5.0e-23 112.1 121 63.6
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 6.6e-23 111.7 146 48.6
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 6.6e-23 111.7 123 61.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 8.6e-23 111.3 121 60.3
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.5e-22 109.8 123 61.0
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 2.5e-22 109.8 122 64.8
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 3.3e-22 109.4 121 52.1
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.3e-22 109.4 123 60.2
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.3e-22 109.0 123 61.0
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.2e-21 107.5 120 67.5
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.6e-21 107.1 122 65.6
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.6e-21 107.1 118 51.7
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 2.1e-21 106.7 116 62.1
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.8e-21 106.3 123 63.4
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 3.6e-21 105.9 120 63.3
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 4.7e-21 105.5 123 48.0
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 4.7e-21 105.5 108 74.1
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.8e-20 103.6 119 61.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.3e-20 103.2 122 64.8
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 4.0e-20 102.4 114 60.5
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.0e-20 102.4 115 63.5
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 6.8e-20 101.7 121 60.3
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 6.8e-20 101.7 121 50.4
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 6.8e-20 101.7 118 62.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 6.8e-20 101.7 146 45.2
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.8e-20 101.7 112 51.8
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 8.9e-20 101.3 104 72.1
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 8.9e-20 101.3 101 51.5
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 8.9e-20 101.3 101 51.5
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 8.9e-20 101.3 101 51.5
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 8.9e-20 101.3 118 63.6
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 1.2e-19 100.9 123 60.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.2e-19 100.9 121 63.6
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.5e-19 100.5 115 60.9
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.0e-19 100.1 119 63.0
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.6e-19 99.8 102 66.7
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.6e-19 99.8 102 66.7
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 4.4e-19 99.0 114 59.6
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 4.4e-19 99.0 121 65.3
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 7.5e-19 98.2 123 60.2
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 9.9e-19 97.8 112 65.2
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 9.9e-19 97.8 113 68.1
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.7e-18 97.1 113 63.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.3e-18 94.7 101 61.4
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.3e-18 94.7 109 50.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.3e-18 94.7 109 50.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.4e-17 93.2 109 49.5
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.4e-17 93.2 109 54.1
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.4e-17 93.2 111 48.6
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 7.1e-17 91.7 103 68.9
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 9.2e-17 91.3 113 59.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.2e-16 90.9 114 63.2
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.6e-16 90.5 107 57.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.7e-16 89.7 114 64.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 4.6e-16 89.0 115 58.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 5.1e-15 85.5 112 59.8
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 6.6e-15 85.1 115 60.0
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-14 84.3 115 59.1
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.3e-14 82.4 115 58.3
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 4.3e-14 82.4 101 44.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 5.6e-14 82.0 113 59.3
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 9.5e-14 81.3 97 59.8
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.2e-13 80.9 100 63.0
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 1.6e-13 80.5 100 60.0
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.6e-13 80.5 124 43.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.6e-13 80.5 113 58.4
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 2.1e-13 80.1 113 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 4.7e-13 79.0 107 43.9
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.7e-13 79.0 113 57.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.4e-12 77.4 125 54.4
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.8e-12 75.1 109 45.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 5.8e-11 72.0 104 44.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 9.9e-11 71.2 116 40.5
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.7e-10 70.5 48 72.9
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 8.4e-10 68.2 72 45.8
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 2.4e-09 66.6 110 37.3
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.1e-08 63.5 105 39.0
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 1.0e-07 61.2 109 35.8
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 3.0e-07 59.7 102 34.3
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 3.9e-07 59.3 75 41.3
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.9e-06 57.0 106 29.2
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 2.5e-06 56.6 145 33.1


User provided reference genes

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