Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.1e-154 547.7 283 100.0
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.0e-122 442.2 283 79.5
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.7e-120 436.4 287 80.1
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.1e-111 405.2 310 70.3
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.3e-109 400.2 293 72.4
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 5.0e-109 398.3 289 74.0
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 7.2e-108 394.4 303 69.6
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.3e-106 389.4 295 71.5
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.2e-105 387.1 284 73.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.5e-105 386.7 283 71.7
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 4.4e-105 385.2 292 68.8
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 4.4e-105 385.2 296 73.3
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 5.7e-105 384.8 292 68.8
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 9.7e-105 384.0 282 72.3
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 2.8e-104 382.5 287 71.1
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.4e-103 380.2 285 71.9
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.1e-103 377.5 297 72.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 1.2e-102 377.1 282 68.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.2e-102 377.1 292 70.9
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 7.7e-102 374.4 295 69.8
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.0e-101 374.0 285 70.5
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.0e-101 374.0 283 71.4
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.1e-100 370.5 286 71.3
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.1e-100 370.5 283 71.7
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.2e-100 368.6 283 68.2
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.5e-100 368.2 285 71.9
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 7.2e-100 367.9 285 71.9
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.2e-99 367.1 281 70.5
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.2e-99 367.1 296 65.5
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.7e-99 365.9 283 69.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 8.0e-99 364.4 296 65.2
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 8.0e-99 364.4 286 71.0
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.4e-98 363.6 285 71.2
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 2.3e-98 362.8 284 68.7
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.2e-97 360.5 284 68.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.7e-97 358.2 286 67.1
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 7.5e-97 357.8 283 66.4
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 7.5e-97 357.8 293 69.3
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.3e-96 357.1 294 70.1
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.2e-96 356.3 321 62.9
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.2e-96 356.3 290 67.2
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 4.8e-96 355.1 285 67.4
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 6.3e-96 354.8 284 66.2
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.1e-95 354.0 412 51.7
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.8e-95 353.2 287 68.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.4e-95 352.8 284 67.3
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.2e-94 350.5 291 68.4
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.0e-94 349.7 309 61.2
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.9e-94 348.2 293 66.6
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.7e-94 347.8 289 63.3
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 7.7e-94 347.8 282 66.7
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.0e-93 347.4 290 69.7
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.3e-93 347.1 283 66.4
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.3e-93 347.1 287 69.3
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 2.3e-93 346.3 284 67.6
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 2.9e-93 345.9 290 67.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.9e-93 345.9 283 65.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.3e-92 342.4 297 64.6
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 7.2e-92 341.3 282 63.8
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.8e-91 339.3 202 83.2
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.8e-91 339.3 285 65.3
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.4e-90 337.0 284 65.5
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 6.8e-90 334.7 368 53.3
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.5e-89 333.6 281 65.5
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 4.4e-89 332.0 296 63.5
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 9.8e-89 330.9 281 64.8
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.1e-87 327.4 277 62.5
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 7.0e-87 324.7 208 77.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 9.2e-87 324.3 288 67.0
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.5e-86 322.4 358 56.1
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 5.9e-86 321.6 284 62.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.7e-85 320.1 283 63.6
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.7e-85 320.1 201 79.1
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 2.9e-85 319.3 281 63.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 8.6e-85 317.8 288 63.5
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 8.6e-85 317.8 294 63.9
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.6e-83 313.5 201 78.1
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.1e-83 313.2 289 59.9
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.4e-82 310.5 282 61.0
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.0e-82 309.3 309 57.9
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 2.6e-81 306.2 282 62.8
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 4.4e-81 305.4 198 76.8
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 7.5e-81 304.7 282 61.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 3.7e-80 302.4 321 56.1
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 3.7e-80 302.4 284 61.6
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 8.3e-80 301.2 303 59.4
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.1e-79 298.9 280 61.1
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.0e-77 292.7 317 56.2
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.9e-77 292.4 202 70.8
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.9e-76 290.0 281 55.9
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 1.8e-74 283.5 204 70.6
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.3e-74 283.1 242 65.3
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 5.2e-74 282.0 195 71.3
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 6.6e-69 265.0 154 84.4
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 1.6e-67 260.4 213 62.4
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.1e-66 257.7 249 60.6
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 2.3e-66 256.5 323 51.7
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 7.3e-60 235.0 161 75.2
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.1e-59 233.4 189 66.7
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.9e-55 220.3 133 83.5
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.1e-55 219.2 131 82.4
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 5.6e-52 208.8 206 58.3
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 5.2e-50 202.2 399 38.6
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.2e-48 196.8 232 48.7
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.7e-45 187.2 211 51.7
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.2e-43 178.7 107 82.2
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.2e-39 166.4 178 57.9
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 3.4e-33 146.4 135 58.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.4e-31 140.2 96 75.0
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.0e-29 133.3 80 78.8
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 5.1e-29 132.5 224 42.9
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.9e-24 116.7 75 74.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 6.0e-22 109.0 286 35.0
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.7e-16 90.9 61 78.7
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.2e-14 84.7 226 30.5
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 8.2e-11 72.0 51 68.6
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.3e-08 64.7 83 43.4
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.5e-07 59.3 38 71.1
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.1e-06 57.4 37 67.6
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.7e-06 57.0 34 76.5
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 7.9e-06 55.5 37 67.6


User provided reference genes

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