Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23245 Nelumbo nucifera HOM05D003185 ORTHO05D007711 7.3e-83 310.5 151 100.0
Nn6g35036 Nelumbo nucifera HOM05D003185 ORTHO05D007711 2.4e-57 225.7 132 83.3
CiPaw.13G140700 Carya illinoinensis HOM05D003185 ORTHO05D007711 4.9e-47 191.4 123 71.5
QL01p013617 Quercus lobata HOM05D003185 ORTHO05D007711 1.9e-46 189.5 122 72.1
PSO384G2827 Papaver somniferum HOM05D003185 ORTHO05D007711 1.8e-44 183.0 122 68.9
Haze_23444 Corylus avellana HOM05D003185 ORTHO05D007711 2.3e-44 182.6 123 69.1
Ciclev10028226m.g Citrus clementina HOM05D003185 ORTHO05D007711 3.9e-44 181.8 120 70.0
Thecc.09G291000 Theobroma cacao HOM05D003185 ORTHO05D007711 5.1e-44 181.4 122 65.6
FvH4_3g24210 Fragaria vesca HOM05D003185 ORTHO05D007711 8.7e-44 180.6 120 66.7
FAN11G0876 Fragaria x ananassa HOM05D003185 ORTHO05D007711 8.7e-44 180.6 120 66.7
PGR119G0956 Punica granatum HOM05D003185 ORTHO05D007711 8.7e-44 180.6 123 67.5
MD11G1158000 Malus domestica HOM05D003185 ORTHO05D007711 1.1e-43 180.3 118 66.9
Cfa010078 Carpinus fangiana HOM05D003185 ORTHO05D007711 1.5e-43 179.9 126 67.5
TAR633G1921 Trochodendron aralioides HOM05D003185 ORTHO05D007711 1.9e-43 179.5 127 65.4
GSVIVG01031393001 Vitis vinifera HOM05D003185 ORTHO05D007711 2.5e-43 179.1 116 69.0
Atru.chr3.3368 Acer truncatum HOM05D003185 ORTHO05D007711 3.3e-43 178.7 122 68.9
Dinv29429 Davidia involucrata HOM05D003185 ORTHO05D007711 3.3e-43 178.7 128 63.3
RcHm_v2.0_Chr5g0043311 Rosa chinensis HOM05D003185 ORTHO05D007711 5.7e-43 177.9 122 63.9
arahy.Tifrunner.gnm1.ann1.7SQ1BH Arachis hypogaea HOM05D003185 ORTHO05D007711 1.3e-42 176.8 127 64.6
Potri.004G187700 Populus trichocarpa HOM05D003185 ORTHO05D007711 1.3e-42 176.8 123 66.7
Cc01_g09760 Coffea canephora HOM05D003185 ORTHO05D007711 1.6e-42 176.4 118 66.9
Duzib168G2119 Durio zibethinus HOM05D003185 ORTHO05D007711 2.1e-42 176.0 122 65.6
PSO339G3172 Papaver somniferum HOM05D003185 ORTHO05D007711 2.1e-42 176.0 120 66.7
Prupe.6G119800 Prunus persica HOM05D003185 ORTHO05D007711 2.1e-42 176.0 122 63.9
arahy.Tifrunner.gnm1.ann1.L3RF3D Arachis hypogaea HOM05D003185 ORTHO05D007711 8.2e-42 174.1 127 63.8
Eucgr.J00431 Eucalyptus grandis HOM05D003185 ORTHO05D007711 8.2e-42 174.1 118 67.8
TWI31G0687 Tripterygium wilfordii HOM05D003185 ORTHO05D007711 8.2e-42 174.1 127 66.1
COL.COLO4_19304 Corchorus olitorius HOM05D003185 ORTHO05D007711 1.1e-41 173.7 116 68.1
ECA248G1096 Erigeron canadensis HOM05D003185 ORTHO05D007711 1.8e-41 172.9 115 67.0
Cpa.g.sc47.69 Carica papaya HOM05D003185 ORTHO05D007711 4.1e-41 171.8 120 65.8
Ca_19376_v3 Cicer arietinum L. HOM05D003185 ORTHO05D007711 4.1e-41 171.8 130 60.0
FAN21G2169 Fragaria x ananassa HOM05D003185 ORTHO05D007711 4.1e-41 171.8 124 62.1
MBI17_g11652_MAGBIO Magnolia biondii HOM05D003185 ORTHO05D007711 4.1e-41 171.8 123 64.2
arahy.Tifrunner.gnm1.ann1.BKN5FL Arachis hypogaea HOM05D003185 ORTHO05D007711 5.3e-41 171.4 124 64.5
CSS0042724 Camellia sinensis var. sinensis HOM05D003185 ORTHO05D007711 5.3e-41 171.4 123 65.0
Gorai.004G008300 Gossypium raimondii HOM05D003185 ORTHO05D007711 5.3e-41 171.4 123 62.6
Psat7g143120 Pisum sativum HOM05D003185 ORTHO05D007711 5.3e-41 171.4 124 62.9
MELO3C021448.2 Cucumis melo HOM05D003185 ORTHO05D007711 9.0e-41 170.6 116 62.9
Manes.11G157700 Manihot esculenta HOM05D003185 ORTHO05D007711 9.0e-41 170.6 123 65.9
Medtr4g055260 Medicago truncatula HOM05D003185 ORTHO05D007711 9.0e-41 170.6 124 63.7
Gohir.D08G014000 Gossypium hirsutum HOM05D003185 ORTHO05D007711 1.2e-40 170.2 123 62.6
HanXRQChr01g0016761 Helianthus annuus HOM05D003185 ORTHO05D007711 1.5e-40 169.9 118 63.6
Gohir.A08G003700 Gossypium hirsutum HOM05D003185 ORTHO05D007711 3.4e-40 168.7 123 62.6
Lj3g0000356 Lotus japonicus HOM05D003185 ORTHO05D007711 3.4e-40 168.7 124 62.9
Phvul.011G090600 Phaseolus vulgaris HOM05D003185 ORTHO05D007711 3.4e-40 168.7 126 61.9
CSS0026325 Camellia sinensis var. sinensis HOM05D003185 ORTHO05D007711 4.5e-40 168.3 123 64.2
CsaV3_6G014770 Cucumis sativus L. HOM05D003185 ORTHO05D007711 4.5e-40 168.3 116 62.1
Glyma.12G085900 Glycine max HOM05D003185 ORTHO05D007711 4.5e-40 168.3 126 62.7
TPR.G15587 Trifolium pratense HOM05D003185 ORTHO05D007711 5.9e-40 167.9 125 59.2
Sed0005848 Sechium edule HOM05D003185 ORTHO05D007711 7.6e-40 167.5 116 62.1
Lalb_Chr01g0004771 Lupinus albus HOM05D003185 ORTHO05D007711 1.0e-39 167.2 127 61.4
Nitab4.5_0003082g0060 Nicotiana tabacum HOM05D003185 ORTHO05D007711 1.3e-39 166.8 115 65.2
Peaxi162Scf00114g00117 Petunia axillaris HOM05D003185 ORTHO05D007711 1.3e-39 166.8 115 66.1
Actinidia35450 Actinidia chinensis HOM05D003185 ORTHO05D007711 1.7e-39 166.4 114 66.7
VMungo1127G1861 Vigna mungo HOM05D003185 ORTHO05D007711 1.7e-39 166.4 124 60.5
Nitab4.5_0008695g0010 Nicotiana tabacum HOM05D003185 ORTHO05D007711 2.2e-39 166.0 115 66.1
Sopen06g030990 Solanum pennellii HOM05D003185 ORTHO05D007711 2.9e-39 165.6 123 62.6
ClCG02G021940 Citrullus lanatus HOM05D003185 ORTHO05D007711 6.5e-39 164.5 116 60.3
SalBow6G4264 Salvia bowleyana HOM05D003185 ORTHO05D007711 8.5e-39 164.1 118 64.4
Solyc06g074510.4 Solanum lycopersicum HOM05D003185 ORTHO05D007711 1.9e-38 162.9 119 63.0
Rhsim01G0207700 Rhododendron simsii HOM05D003185 ORTHO05D007711 2.5e-38 162.5 114 65.8
vmacro14358 Vaccinium macrocarpon HOM05D003185 ORTHO05D007711 2.5e-38 162.5 123 61.8
PGSC0003DMG400007149 Solanum tuberosum HOM05D003185 ORTHO05D007711 4.2e-38 161.8 123 61.0
CANSAT54G2969 Cannabis sativa HOM05D003185 ORTHO05D007711 1.2e-37 160.2 112 63.4
THA.LOC104799537 Tarenaya hassleriana HOM05D003185 ORTHO05D007711 1.6e-37 159.8 131 60.3
Actinidia37095 Actinidia chinensis HOM05D003185 ORTHO05D007711 2.7e-37 159.1 113 62.8
Lsat_1_v5_gn_1_62161 Lactuca sativa HOM05D003185 ORTHO05D007711 3.6e-37 158.7 118 61.9
Aqoxy2G01378 Aquilegia oxysepala HOM05D003185 ORTHO05D007711 1.0e-36 157.1 113 61.1
AUR62023927 Chenopodium quinoa HOM05D003185 ORTHO05D007711 8.7e-36 154.1 116 60.3
CAN.G919.9 Capsicum annuum HOM05D003185 ORTHO05D007711 1.5e-35 153.3 116 62.9
Atru.BG.121.p Acer truncatum HOM05D003185 ORTHO05D007711 5.7e-35 151.4 100 70.0
CDE06G0630 Ceratophyllum demersum HOM05D003185 ORTHO05D007711 9.7e-35 150.6 116 61.2
EL10Ac9g21089 Beta vulgaris HOM05D003185 ORTHO05D007711 4.8e-34 148.3 105 64.8
Ah.01g004570 Amaranthus hybridus HOM05D003185 ORTHO05D007711 1.4e-33 146.7 123 54.5
Oeu010656.1 Olea europaea HOM05D003185 ORTHO05D007711 1.8e-33 146.4 106 64.2
Hund00771 Selenicereus undatus HOM05D003185 ORTHO05D007711 1.8e-33 146.4 114 56.1
DCAR_012167 Daucus carota HOM05D003185 ORTHO05D007711 2.4e-33 146.0 109 59.6
Migut.D02358 Erythranthe guttata HOM05D003185 ORTHO05D007711 3.1e-33 145.6 116 57.8
Thhalv10013362m.g Eutrema salsugineum HOM05D003185 ORTHO05D007711 6.9e-33 144.4 114 58.8
unitig_747.g21955 Utricularia gibba HOM05D003185 ORTHO05D007711 2.6e-32 142.5 116 56.0
BcaB05g22717 Brassica carinata HOM05D003185 ORTHO05D007711 1.3e-31 140.2 110 59.1
SGA_v2.0_scaffold27G11620 Striga asiatica HOM05D003185 ORTHO05D007711 1.7e-31 139.8 109 57.8
Carub.0006s2034 Capsella rubella HOM05D003185 ORTHO05D007711 2.2e-31 139.4 114 60.5
HPP92_009049 Vanilla planifolia HOM05D003185 ORTHO05D007711 2.2e-31 139.4 115 57.4
Sp6g22720 Schrenkiella parvula HOM05D003185 ORTHO05D007711 3.8e-31 138.7 114 57.0
Os11g0150100 Oryza sativa ssp. japonica HOM05D003185 ORTHO05D007711 6.5e-31 137.9 115 56.5
AL6G33640 Arabidopsis lyrata HOM05D003185 ORTHO05D007711 3.2e-30 135.6 113 59.3
ATR0820G288 Amborella trichopoda HOM05D003185 ORTHO05D007711 7.2e-30 134.4 102 58.8
Hma1.2p1_0097F.1_g048020 Hydrangea macrophylla HOM05D003185 ORTHO05D007711 9.4e-30 134.0 77 79.2
AT5G22620 Arabidopsis thaliana HOM05D003185 ORTHO05D007711 2.0e-27 126.3 102 59.8
BNapus_Darmor_BZH_scaffold_38p00540 Brassica napus HOM05D003185 ORTHO05D007711 2.0e-27 126.3 109 55.0
BraA02t05669Z Brassica rapa HOM05D003185 ORTHO05D007711 2.0e-27 126.3 109 55.0
BcaC03g13898 Brassica carinata HOM05D003185 ORTHO05D007711 2.6e-27 125.9 107 57.0
C02p11040 Brassica napus HOM05D003185 ORTHO05D007711 2.6e-27 125.9 107 57.0
BolC2t07176H Brassica oleracea HOM05D003185 ORTHO05D007711 2.6e-27 125.9 107 57.0
CARHR190960 Cardamine hirsuta HOM05D003185 ORTHO05D007711 2.6e-27 125.9 110 58.2
Aa31LG1G13020 Aethionema arabicum HOM05D003185 ORTHO05D007711 7.4e-27 124.4 109 55.0
SEGI_21285 Sequoiadendron giganteum HOM05D003185 ORTHO05D007711 9.7e-27 124.0 116 50.9
SEGI_02723 Sequoiadendron giganteum HOM05D003185 ORTHO05D007711 1.3e-26 123.6 116 50.9
Pp3c25_8910 Physcomitrium patens HOM05D003185 ORTHO05D007711 1.4e-25 120.2 111 47.7
Zm00001eb196880 Zea mays HOM05D003185 ORTHO05D007711 1.8e-25 119.8 103 54.4
Lj1A222T57 Lonicera japonica HOM05D003185 ORTHO05D007711 1.5e-24 116.7 88 61.4
VMungo0647G2586 Vigna mungo HOM05D009237 ORTHO05D010310 3.2e-22 109.0 101 49.5
CBR_g223 Chara braunii HOM05D003185 ORTHO05D007711 3.6e-21 105.5 114 43.0
AagrBONN_evm.TU.Sc2ySwM_368.2291 Anthoceros agrestis HOM05D003185 ORTHO05D007711 4.7e-21 105.1 109 45.0
SMO367G1083 Selaginella moellendorffii HOM05D003185 ORTHO05D007711 8.8e-20 100.9 133 41.4
Mapoly0014s0161 Marchantia polymorpha HOM05D003185 ORTHO05D007711 1.7e-15 86.7 106 40.6


User provided reference genes

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