Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23231 Nelumbo nucifera HOM05D032514 ORTHO05D003574 1.2e-115 419.9 211 100.0
Nn1g04523 Nelumbo nucifera HOM05D032514 ORTHO05D003574 1.3e-109 399.8 213 96.2
ATR0564G514 Amborella trichopoda HOM05D003200 ORTHO05D003574 5.0e-21 105.5 189 41.3
MBI05_g36414_MAGBIO Magnolia biondii HOM05D032514 ORTHO05D003574 2.8e-16 89.7 161 40.4
SEGI_09724 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 2.3e-10 70.1 180 35.6
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 2.8e-08 63.2 198 31.8
ATR0807G127 Amborella trichopoda HOM05D003200 ORTHO05D003574 3.7e-08 62.8 190 33.7
Phvul.005G040500 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 3.7e-08 62.8 150 34.7
A10p19820 Brassica napus HOM05D003200 ORTHO05D003574 8.3e-08 61.6 175 34.3
BraA10t44058Z Brassica rapa HOM05D003200 ORTHO05D003574 8.3e-08 61.6 175 34.3
Glyma.15G268900 Glycine max HOM05D003200 ORTHO05D003574 8.3e-08 61.6 162 34.0
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 8.3e-08 61.6 185 34.6
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 1.1e-07 61.2 168 33.9
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 1.1e-07 61.2 203 30.5
VMungo1080G1115 Vigna mungo HOM05D003200 ORTHO05D003574 1.1e-07 61.2 150 34.0
Ca_02880_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 1.4e-07 60.8 171 33.9
C09p56140 Brassica napus HOM05D003200 ORTHO05D003574 1.8e-07 60.5 175 33.7
BolC9t58481H Brassica oleracea HOM05D003200 ORTHO05D003574 1.8e-07 60.5 175 33.7
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 2.4e-07 60.1 195 31.8
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 3.1e-07 59.7 177 32.8
BcaC04g19396 Brassica carinata HOM05D003200 ORTHO05D003574 4.1e-07 59.3 175 33.1
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 4.1e-07 59.3 176 33.5
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 5.4e-07 58.9 202 32.2
Rhsim13G0227400 Rhododendron simsii HOM05D003200 ORTHO05D003574 5.4e-07 58.9 165 34.5
A02p05900 Brassica napus HOM05D003200 ORTHO05D003574 7.0e-07 58.5 176 32.4
BraA02t05542Z Brassica rapa HOM05D003200 ORTHO05D003574 7.0e-07 58.5 176 32.4
Thhalv10013350m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 7.0e-07 58.5 204 31.4
Sp6g24480 Schrenkiella parvula HOM05D003200 ORTHO05D003574 7.0e-07 58.5 196 32.1
BcaB08g36558 Brassica carinata HOM05D003200 ORTHO05D003574 9.1e-07 58.2 175 33.1
Lsat_1_v5_gn_1_68481 Lactuca sativa HOM05D003200 ORTHO05D003574 9.1e-07 58.2 179 33.5
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 9.1e-07 58.2 191 33.0
MSTRG.18395 Avicennia marina HOM05D003200 ORTHO05D003574 1.2e-06 57.8 172 32.6
CARHR192960 Cardamine hirsuta HOM05D003200 ORTHO05D003574 1.2e-06 57.8 193 32.1
MD11G1016000 Malus domestica HOM05D003200 ORTHO05D003574 1.2e-06 57.8 197 30.5
MSTRG.17558 Avicennia marina HOM05D003200 ORTHO05D003574 1.6e-06 57.4 171 32.7
BolC3t13598H Brassica oleracea HOM05D003200 ORTHO05D003574 1.6e-06 57.4 181 33.7
ECA233G5951 Erigeron canadensis HOM05D003200 ORTHO05D003574 1.6e-06 57.4 207 30.0
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 1.6e-06 57.4 207 31.4
AL6G31430 Arabidopsis lyrata HOM05D003200 ORTHO05D003574 2.0e-06 57.0 193 31.6
AT5G19900 Arabidopsis thaliana HOM05D003200 ORTHO05D003574 2.0e-06 57.0 193 31.6
Carub.0006s1827 Capsella rubella HOM05D003200 ORTHO05D003574 2.0e-06 57.0 193 31.6
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 2.0e-06 57.0 177 32.2
SEGI_15047 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 2.0e-06 57.0 228 29.8
A03p09700 Brassica napus HOM05D003200 ORTHO05D003574 2.7e-06 56.6 181 33.1
BraA03t10286Z Brassica rapa HOM05D003200 ORTHO05D003574 2.7e-06 56.6 181 33.1
Eucgr.B02607 Eucalyptus grandis HOM05D003200 ORTHO05D003574 2.7e-06 56.6 197 29.4
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 2.7e-06 56.6 181 31.5
BcaB01g04823 Brassica carinata HOM05D003200 ORTHO05D003574 3.5e-06 56.2 182 33.0
SEGI_19228 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 3.5e-06 56.2 202 30.7
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 4.5e-06 55.8 174 34.5
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 4.5e-06 55.8 177 33.9
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 4.5e-06 55.8 177 33.9
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 5.9e-06 55.5 177 31.1
C03p11280 Brassica napus HOM05D003200 ORTHO05D003574 5.9e-06 55.5 182 33.0
Ciclev10015088m.g Citrus clementina HOM05D003200 ORTHO05D003574 5.9e-06 55.5 172 34.9
MD03G1014800 Malus domestica HOM05D003200 ORTHO05D003574 5.9e-06 55.5 197 28.9
Prupe.6G014100 Prunus persica HOM05D003200 ORTHO05D003574 5.9e-06 55.5 199 30.2
FvH4_3g44330 Fragaria vesca HOM05D003200 ORTHO05D003574 7.7e-06 55.1 191 31.4
FAN11G2071 Fragaria x ananassa HOM05D003200 ORTHO05D003574 7.7e-06 55.1 191 31.4
FAN16G1057 Fragaria x ananassa HOM05D003200 ORTHO05D003574 7.7e-06 55.1 191 31.4
FAN21G1034 Fragaria x ananassa HOM05D003200 ORTHO05D003574 7.7e-06 55.1 191 31.4
FAN25G2592 Fragaria x ananassa HOM05D003200 ORTHO05D003574 7.7e-06 55.1 191 31.4
Medtr1g116330 Medicago truncatula HOM05D003200 ORTHO05D003574 7.7e-06 55.1 201 30.3
SalBow2G0964 Salvia bowleyana HOM05D003200 ORTHO05D003574 7.7e-06 55.1 166 33.1
TAR636G3550 Trochodendron aralioides HOM05D003200 ORTHO05D003574 7.7e-06 55.1 173 33.5


User provided reference genes

Program Settings