Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23221 Nelumbo nucifera HOM05D000892 ORTHO05D279685 2.4e-68 261.9 124 100.0
Nn8g39396 Nelumbo nucifera HOM05D000892 ORTHO05D000750 7.9e-35 150.6 116 69.8
Nn6g33269 Nelumbo nucifera HOM05D000892 ORTHO05D000750 1.6e-30 136.3 119 64.7
TAR629G2972 Trochodendron aralioides HOM05D000892 ORTHO05D000750 8.2e-24 114.0 114 55.3
Nn3g18832 Nelumbo nucifera HOM05D000892 ORTHO05D000750 1.2e-22 110.2 123 48.8
Nn4g24099 Nelumbo nucifera HOM05D000892 ORTHO05D000750 3.6e-19 98.6 116 53.4
TAR375G0361 Trochodendron aralioides HOM05D000892 ORTHO05D000750 2.6e-17 92.4 121 47.9
Dinv34248 Davidia involucrata HOM05D000892 ORTHO05D000750 6.3e-16 87.8 127 42.5
Nn3g20242 Nelumbo nucifera HOM05D000892 ORTHO05D273234 1.4e-15 86.7 81 60.5
Dinv32632 Davidia involucrata HOM05D000892 ORTHO05D000750 9.1e-15 84.0 127 41.7
PSO384G3020 Papaver somniferum HOM05D000892 ORTHO05D000750 5.9e-14 81.3 134 41.0
GSVIVG01027410001 Vitis vinifera HOM05D000892 ORTHO05D000750 1.7e-13 79.7 113 46.9
PSO135G0458 Papaver somniferum HOM05D000892 ORTHO05D000750 2.2e-13 79.3 134 42.5
Hma1.2p1_0309F.1_g120550 Hydrangea macrophylla HOM05D000892 ORTHO05D000750 2.9e-13 79.0 133 38.3
Gohir.A12G115200 Gossypium hirsutum HOM05D000892 ORTHO05D000750 6.5e-13 77.8 119 38.7
Manes.05G018300 Manihot esculenta HOM05D000892 ORTHO05D000750 6.5e-13 77.8 135 37.0
Cfa003754 Carpinus fangiana HOM05D000892 ORTHO05D000750 1.9e-12 76.3 133 39.8
Nitab4.5_0000307g0190 Nicotiana tabacum HOM05D000892 ORTHO05D000750 3.2e-12 75.5 120 40.8
Cpa.g.sc144.4 Carica papaya HOM05D000892 ORTHO05D000750 9.4e-12 73.9 135 35.6
CiPaw.02G044100 Carya illinoinensis HOM05D000892 ORTHO05D000750 9.4e-12 73.9 138 34.1
Potri.014G103600 Populus trichocarpa HOM05D000892 ORTHO05D000750 1.6e-11 73.2 129 37.2
Glyma.19G258900 Glycine max HOM05D000892 ORTHO05D000750 3.6e-11 72.0 137 38.0
Actinidia20273 Actinidia chinensis HOM05D000892 ORTHO05D000750 4.7e-11 71.6 132 36.4
Gorai.007G111700 Gossypium raimondii HOM05D000892 ORTHO05D000750 4.7e-11 71.6 128 35.9
Lj1g0016865 Lotus japonicus HOM05D000892 ORTHO05D000750 8.0e-11 70.9 136 35.3
Haze_15711 Corylus avellana HOM05D000892 ORTHO05D000750 1.4e-10 70.1 139 36.7
Sabra14G0076200 Salix brachista HOM05D000892 ORTHO05D000750 1.4e-10 70.1 126 38.1
TWI59G1462 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 1.8e-10 69.7 132 38.6
Phvul.006G116300 Phaseolus vulgaris HOM05D000892 ORTHO05D000750 2.3e-10 69.3 142 34.5
Ah.05g179130 Amaranthus hybridus HOM05D000892 ORTHO05D000750 3.0e-10 68.9 127 36.2
Gohir.D11G104400 Gossypium hirsutum HOM05D000892 ORTHO05D000750 3.0e-10 68.9 128 35.9
Sabra02G0136900 Salix brachista HOM05D000892 ORTHO05D000750 3.0e-10 68.9 125 37.6
ATR0620G115 Amborella trichopoda HOM05D000892 ORTHO05D000750 4.0e-10 68.6 65 50.8
Gohir.D12G118700 Gossypium hirsutum HOM05D000892 ORTHO05D000750 4.0e-10 68.6 119 37.0
TPR.G30157 Trifolium pratense HOM05D000892 ORTHO05D000750 4.0e-10 68.6 127 35.4
Peaxi162Scf00767g00413 Petunia axillaris HOM05D000892 ORTHO05D000750 5.2e-10 68.2 125 38.4
Thecc.01G335700 Theobroma cacao HOM05D000892 ORTHO05D000750 5.2e-10 68.2 137 32.8
Potri.002G176800 Populus trichocarpa HOM05D000892 ORTHO05D000750 6.8e-10 67.8 133 35.3
Solyc01g096360.3 Solanum lycopersicum HOM05D000892 ORTHO05D000750 8.8e-10 67.4 125 36.8
MSTRG.17379 Avicennia marina HOM05D000892 ORTHO05D000750 1.2e-09 67.0 123 32.5
CANSAT56G2252 Cannabis sativa HOM05D000892 ORTHO05D000750 1.2e-09 67.0 136 33.8
CANSAT56G2935 Cannabis sativa HOM05D000892 ORTHO05D000750 1.2e-09 67.0 136 33.8
QL08p046610 Quercus lobata HOM05D000892 ORTHO05D000750 1.2e-09 67.0 142 35.2
Sopen01g040110 Solanum pennellii HOM05D000892 ORTHO05D000750 1.2e-09 67.0 126 37.3
PGSC0003DMG400000130 Solanum tuberosum HOM05D000892 ORTHO05D000750 1.2e-09 67.0 124 37.1
COL.COLO4_06222 Corchorus olitorius HOM05D000892 ORTHO05D000750 1.5e-09 66.6 144 31.9
Gohir.A11G099800 Gossypium hirsutum HOM05D000892 ORTHO05D000750 1.5e-09 66.6 127 35.4
Actinidia07993 Actinidia chinensis HOM05D000892 ORTHO05D000750 2.0e-09 66.2 49 65.3
VMungo0540G0334 Vigna mungo HOM05D000892 ORTHO05D000750 2.0e-09 66.2 141 34.0
Glyma.03G259800 Glycine max HOM05D000892 ORTHO05D000750 3.4e-09 65.5 139 33.8
Gorai.008G128400 Gossypium raimondii HOM05D000892 ORTHO05D000750 3.4e-09 65.5 119 36.1
Medtr8g026680 Medicago truncatula HOM05D000892 ORTHO05D000750 5.7e-09 64.7 53 52.8
Oeu022797.1 Olea europaea HOM05D000892 ORTHO05D000750 9.8e-09 63.9 141 33.3
Hund16740 Selenicereus undatus HOM05D000892 ORTHO05D000750 9.8e-09 63.9 121 38.8
Psat4g162840 Pisum sativum HOM05D000892 ORTHO05D000750 1.7e-08 63.2 47 59.6
CAN.G1045.43 Capsicum annuum HOM05D000892 ORTHO05D000750 2.2e-08 62.8 121 36.4
Gohir.D08G144800 Gossypium hirsutum HOM05D000892 ORTHO05D000750 2.2e-08 62.8 127 31.5
Gorai.004G149600 Gossypium raimondii HOM05D000892 ORTHO05D000750 2.2e-08 62.8 127 31.5
MD07G1156800 Malus domestica HOM05D000892 ORTHO05D000750 2.8e-08 62.4 142 33.8
Gohir.A08G123400 Gossypium hirsutum HOM05D000892 ORTHO05D000750 4.9e-08 61.6 127 30.7
CDE04G2466 Ceratophyllum demersum HOM05D000892 ORTHO05D000750 6.3e-08 61.2 48 52.1
TWI23G0136 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 6.3e-08 61.2 133 38.3
EL10Ac1g00204 Beta vulgaris HOM05D000892 ORTHO05D000750 8.3e-08 60.8 115 40.9
MD01G1086700 Malus domestica HOM05D000892 ORTHO05D000750 8.3e-08 60.8 148 31.8
CSS0025243 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D000750 2.4e-07 59.3 142 31.7
ClCG05G000520 Citrullus lanatus HOM05D000892 ORTHO05D000750 2.4e-07 59.3 70 45.7
MELO3C005990.2 Cucumis melo HOM05D000892 ORTHO05D000750 2.4e-07 59.3 70 47.1
CsaV3_3G007720 Cucumis sativus L. HOM05D000892 ORTHO05D000750 2.4e-07 59.3 70 47.1
Actinidia24219 Actinidia chinensis HOM05D000892 ORTHO05D000750 3.1e-07 58.9 103 36.9
Duzib133G1091 Durio zibethinus HOM05D000892 ORTHO05D000750 3.1e-07 58.9 137 31.4
Duzib138G0132 Durio zibethinus HOM05D000892 ORTHO05D000750 3.1e-07 58.9 140 32.1
Prupe.2G195100 Prunus persica HOM05D000892 ORTHO05D000750 3.1e-07 58.9 146 32.2
Eucgr.E00020 Eucalyptus grandis HOM05D000892 ORTHO05D000750 4.1e-07 58.5 50 52.0
Lj9A603G31 Lonicera japonica HOM05D000892 ORTHO05D000750 4.1e-07 58.5 49 46.9
Sc23g0001890 Simmondsia chinensis HOM05D000892 ORTHO05D000750 5.4e-07 58.2 48 54.2
Ciclev10024101m.g Citrus clementina HOM05D000892 ORTHO05D000750 7.0e-07 57.8 63 47.6
MBI12_g40860_MAGBIO Magnolia biondii HOM05D000892 ORTHO05D000750 7.0e-07 57.8 45 55.6
RcHm_v2.0_Chr1g0360801 Rosa chinensis HOM05D000892 ORTHO05D000750 9.2e-07 57.4 138 31.9
Sed0015971 Sechium edule HOM05D000892 ORTHO05D000750 9.2e-07 57.4 68 44.1
CDE06G0225 Ceratophyllum demersum HOM05D000892 ORTHO05D000750 1.2e-06 57.0 52 42.3
Sc21g0007030 Simmondsia chinensis HOM05D000892 ORTHO05D000750 1.2e-06 57.0 44 54.5
Eucgr.J00501 Eucalyptus grandis HOM05D000892 ORTHO05D000750 2.0e-06 56.2 48 47.9
THA.LOC104817394 Tarenaya hassleriana HOM05D000892 ORTHO05D000750 2.0e-06 56.2 82 39.0
Lj3g0024254 Lotus japonicus HOM05D000892 ORTHO05D000750 2.7e-06 55.8 86 34.9
Oeu042958.1 Olea europaea HOM05D000892 ORTHO05D000750 2.7e-06 55.8 112 32.1
TAR636G1237 Trochodendron aralioides HOM05D000892 ORTHO05D000750 2.7e-06 55.8 81 33.3
Lsat_1_v5_gn_7_201 Lactuca sativa HOM05D000892 ORTHO05D000750 3.5e-06 55.5 126 34.1
Lalb_Chr04g0261351 Lupinus albus HOM05D000892 ORTHO05D000750 4.5e-06 55.1 136 30.9
TWI79G0474 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 4.5e-06 55.1 114 32.5
arahy.Tifrunner.gnm1.ann1.FN90XN Arachis hypogaea HOM05D000892 ORTHO05D000750 5.9e-06 54.7 59 44.1
arahy.Tifrunner.gnm1.ann1.YFY9ZJ Arachis hypogaea HOM05D000892 ORTHO05D000750 5.9e-06 54.7 59 44.1
Nn6g34856 Nelumbo nucifera HOM05D000892 ORTHO05D000750 5.9e-06 54.7 49 46.9


User provided reference genes

Program Settings