Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 4.6e-36 154.1 79 100.0
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 2.5e-18 95.1 82 69.5
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 8.4e-14 80.1 83 55.4
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 8.7e-11 70.1 75 50.7
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 9.6e-10 66.6 85 48.2
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 9.6e-10 66.6 81 48.1
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.6e-09 65.9 79 46.8
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 3.7e-09 64.7 77 49.4
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 4.8e-09 64.3 81 46.9
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 4.8e-09 64.3 78 48.7
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 6.2e-09 63.9 75 46.7
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.1e-08 63.2 77 49.4
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.8e-08 62.4 81 46.9
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 1.8e-08 62.4 81 46.9
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 6.9e-08 60.5 80 46.2
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 9.0e-08 60.1 77 48.1
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 9.0e-08 60.1 79 44.3
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 9.0e-08 60.1 76 47.4
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 2.0e-07 58.9 77 41.6
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 3.4e-07 58.2 79 45.6
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 4.5e-07 57.8 76 44.7
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 9.9e-07 56.6 84 45.2
Manes.02G047166 Manihot esculenta HOM05D008206 ORTHO05D010320 9.9e-07 56.6 78 46.2
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.7e-06 55.8 79 44.3
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 1.7e-06 55.8 79 46.8
CSS0033569 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 2.2e-06 55.5 78 47.4
Gohir.D12G128666 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.9e-06 55.1 74 43.2
Actinidia26223 Actinidia chinensis HOM05D008206 ORTHO05D010320 3.8e-06 54.7 76 46.1
CSS0025041 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 4.9e-06 54.3 78 47.4
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 4.9e-06 54.3 79 43.0
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 4.9e-06 54.3 79 43.0
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 4.9e-06 54.3 79 43.0
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 6.4e-06 53.9 83 43.4
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 6.4e-06 53.9 79 43.0
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 8.4e-06 53.5 80 41.2


User provided reference genes

Program Settings