Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23093 Nelumbo nucifera HOM05D001841 ORTHO05D001767 2.1e-45 185.3 89 100.0
Nn2g12706 Nelumbo nucifera HOM05D001841 ORTHO05D001767 2.5e-14 82.0 93 57.0
Nn1g05855 Nelumbo nucifera HOM05D001841 ORTHO05D001767 1.0e-12 76.6 122 41.8
Medtr4g086620 Medicago truncatula HOM05D001841 ORTHO05D001767 2.8e-10 68.6 114 41.2
Glyma.07G177600 Glycine max HOM05D001841 ORTHO05D001767 1.8e-09 65.9 97 42.3
TAR376G0142 Trochodendron aralioides HOM05D001841 ORTHO05D001767 3.1e-09 65.1 131 39.7
TAR381G0762 Trochodendron aralioides HOM05D001841 ORTHO05D001767 3.1e-09 65.1 135 40.0
Atru.chr5.2772 Acer truncatum HOM05D001841 ORTHO05D001767 9.2e-09 63.5 105 40.0
Actinidia00458 Actinidia chinensis HOM05D001841 ORTHO05D001767 9.2e-09 63.5 112 38.4
Glyma.20G010200 Glycine max HOM05D001841 ORTHO05D001767 1.2e-08 63.2 83 43.4
Nn4g25773 Nelumbo nucifera HOM05D001841 ORTHO05D001767 2.7e-08 62.0 48 70.8
Phvul.003G012800 Phaseolus vulgaris HOM05D001841 ORTHO05D001767 7.8e-08 60.5 104 39.4
VMungo1215G0333 Vigna mungo HOM05D001841 ORTHO05D001767 7.8e-08 60.5 104 38.5
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 1.0e-07 60.1 48 66.7
TAR625G0113 Trochodendron aralioides HOM05D001841 ORTHO05D001767 1.0e-07 60.1 130 39.2
TWI31G1305 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 1.3e-07 59.7 113 33.6
Actinidia15261 Actinidia chinensis HOM05D001841 ORTHO05D001767 1.7e-07 59.3 125 37.6
Gohir.A03G087800 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.7e-07 59.3 122 37.7
Gohir.D13G037500 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.3e-07 58.9 124 37.1
Gorai.013G042200 Gossypium raimondii HOM05D001841 ORTHO05D001767 2.3e-07 58.9 124 37.1
Hma1.2p1_0370F.1_g138000 Hydrangea macrophylla HOM05D001841 ORTHO05D001767 2.3e-07 58.9 48 54.2
CAN.G213.2 Capsicum annuum HOM05D001841 ORTHO05D001767 3.9e-07 58.2 97 42.3
Ca_18656_v3 Cicer arietinum L. HOM05D001841 ORTHO05D001767 3.9e-07 58.2 103 39.8
Gohir.A12G025600 Gossypium hirsutum HOM05D001841 ORTHO05D001767 3.9e-07 58.2 108 37.0
Nitab4.5_0001413g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 3.9e-07 58.2 120 35.8
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 6.6e-07 57.4 114 36.8
Glyma.07G210700 Glycine max HOM05D001841 ORTHO05D001767 8.6e-07 57.0 91 44.0
Gohir.A03G191800 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.5e-06 56.2 99 35.4
Gohir.A13G039000 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.5e-06 56.2 124 37.1
Gohir.D02G092900 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.5e-06 56.2 123 38.2
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 1.5e-06 56.2 64 46.9
Lalb_Chr16g0384591 Lupinus albus HOM05D001841 ORTHO05D001767 1.5e-06 56.2 104 36.5
CDE03G0088 Ceratophyllum demersum HOM05D000370 ORTHO05D001767 1.9e-06 55.8 106 38.7
CAN.G213.4 Capsicum annuum HOM05D001841 ORTHO05D001767 2.5e-06 55.5 91 39.6
CDE06G1867 Ceratophyllum demersum HOM05D000370 ORTHO05D001366 2.5e-06 55.5 112 37.5
Gorai.005G240700 Gossypium raimondii HOM05D001841 ORTHO05D001767 2.5e-06 55.5 99 35.4
Sopen12g006960 Solanum pennellii HOM05D001841 ORTHO05D001767 2.5e-06 55.5 98 35.7
Eucgr.I01168 Eucalyptus grandis HOM05D001841 ORTHO05D001767 3.3e-06 55.1 123 35.0
Gohir.A01G006300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 3.3e-06 55.1 122 36.1
TWI36G0039 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 4.3e-06 54.7 130 35.4
Gohir.D02G212700 Gossypium hirsutum HOM05D001841 ORTHO05D001767 5.6e-06 54.3 99 35.4
Solyc12g013610.2 Solanum lycopersicum HOM05D001841 ORTHO05D001767 5.6e-06 54.3 94 34.0
VMungo0251G0262 Vigna mungo HOM05D001841 ORTHO05D001767 5.6e-06 54.3 85 42.4
Gohir.D12G025300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 7.3e-06 53.9 109 34.9
Gorai.008G025600 Gossypium raimondii HOM05D001841 ORTHO05D001767 7.3e-06 53.9 99 36.4
Sabra04G0095000 Salix brachista HOM05D001841 ORTHO05D001767 9.5e-06 53.5 89 40.4


User provided reference genes

Program Settings