Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 7.7e-121 437.2 224 100.0
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 5.1e-24 115.5 190 41.1
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.4e-21 107.5 188 38.8
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.8e-21 107.1 195 40.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.1e-21 106.3 121 49.6
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.1e-21 106.3 103 55.3
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.3e-21 105.5 184 37.0
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 5.3e-21 105.5 120 50.0
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 6.9e-21 105.1 120 50.0
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.2e-20 104.4 102 54.9
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.5e-20 104.0 187 38.0
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 2.0e-20 103.6 120 49.2
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.0e-20 103.6 187 38.0
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.6e-20 103.2 120 48.3
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.6e-20 103.2 188 38.8
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 4.5e-20 102.4 184 38.6
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 4.5e-20 102.4 122 47.5
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 5.9e-20 102.1 184 41.3
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 7.6e-20 101.7 102 52.9
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.0e-19 101.3 99 53.5
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.7e-19 100.5 119 47.9
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 2.2e-19 100.1 120 47.5
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 2.9e-19 99.8 103 52.4
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.8e-19 99.4 185 37.3
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.8e-19 99.4 185 37.3
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 5.0e-19 99.0 135 42.2
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 6.5e-19 98.6 116 48.3
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 6.5e-19 98.6 99 53.5
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 6.5e-19 98.6 120 46.7
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 8.5e-19 98.2 161 40.4
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.4e-18 97.4 184 38.6
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 1.9e-18 97.1 120 46.7
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.9e-18 97.1 103 50.5
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 2.5e-18 96.7 103 51.5
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 3.2e-18 96.3 103 51.5
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 4.2e-18 95.9 99 50.5
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 5.5e-18 95.5 120 45.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 5.5e-18 95.5 99 52.5
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 5.5e-18 95.5 119 44.5
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 9.3e-18 94.7 99 51.5
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 9.3e-18 94.7 99 50.5
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 9.3e-18 94.7 103 48.5
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 1.2e-17 94.4 99 50.5
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.2e-17 94.4 186 38.7
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 1.2e-17 94.4 186 38.2
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 1.6e-17 94.0 103 49.5
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.6e-17 94.0 99 50.5
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.6e-17 94.0 187 37.4
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.6e-17 94.0 99 50.5
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 1.6e-17 94.0 99 50.5
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.6e-17 94.0 103 48.5
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 2.1e-17 93.6 123 43.9
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 2.7e-17 93.2 150 38.7
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 3.6e-17 92.8 184 37.0
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 4.6e-17 92.4 98 54.1
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 4.6e-17 92.4 98 54.1
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 4.6e-17 92.4 157 40.1
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 4.6e-17 92.4 157 40.1
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 6.1e-17 92.0 186 39.2
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 7.9e-17 91.7 99 52.5
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 7.9e-17 91.7 212 34.9
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.3e-16 90.9 99 47.5
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.3e-16 90.9 193 36.3
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.8e-16 90.5 98 52.0
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.8e-16 90.5 99 49.5
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 2.3e-16 90.1 157 38.9
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.0e-16 89.7 120 44.2
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 3.0e-16 89.7 101 47.5
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 5.1e-16 89.0 103 47.6
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 6.7e-16 88.6 171 36.3
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 8.7e-16 88.2 119 42.9
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.1e-15 87.8 135 36.3
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 1.1e-15 87.8 99 48.5
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.5e-15 87.4 102 48.0
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.9e-15 87.0 102 47.1
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.9e-15 87.0 102 47.1
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 1.9e-15 87.0 120 44.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.5e-15 86.7 102 46.1
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.5e-15 86.7 102 46.1
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.5e-15 86.7 102 46.1
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.3e-15 86.3 102 47.1
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 4.3e-15 85.9 102 46.1
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 9.7e-15 84.7 98 50.0
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-14 84.3 102 46.1
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-14 84.0 102 45.1
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-14 84.0 102 45.1
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-14 84.0 102 45.1
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 1.6e-14 84.0 102 45.1
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.2e-14 83.6 102 44.1
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 2.2e-14 83.6 120 39.2
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.8e-14 83.2 99 45.5
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 3.7e-14 82.8 113 45.1
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.7e-14 82.8 101 44.6
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 6.3e-14 82.0 103 43.7
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 6.3e-14 82.0 125 39.2
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 6.3e-14 82.0 125 39.2
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 6.3e-14 82.0 125 39.2
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 8.2e-14 81.6 101 46.5
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 8.2e-14 81.6 167 35.9
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-13 81.3 167 35.9
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 1.1e-13 81.3 101 45.5
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 1.1e-13 81.3 100 46.0
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.1e-13 81.3 189 35.4
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.4e-13 80.1 124 41.1
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 2.4e-13 80.1 99 45.5
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 3.1e-13 79.7 125 37.6
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 3.1e-13 79.7 125 37.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 4.1e-13 79.3 125 40.0
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 4.1e-13 79.3 125 40.0
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 4.1e-13 79.3 120 41.7
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 5.3e-13 79.0 101 43.6
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 6.9e-13 78.6 101 44.6
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 6.9e-13 78.6 101 45.5
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.2e-12 77.8 100 42.0
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.5e-12 77.4 124 40.3
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.5e-12 77.4 124 40.3
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 5.9e-12 75.5 125 36.8
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 3.8e-11 72.8 48 70.8
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 3.8e-11 72.8 152 34.2
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 3.2e-10 69.7 45 66.7
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.6e-09 67.4 86 45.3
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 2.3e-08 63.5 139 36.0
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 3.0e-08 63.2 86 41.9
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 3.9e-08 62.8 90 41.1
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 5.1e-08 62.4 182 29.1
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 8.8e-08 61.6 104 36.5


User provided reference genes

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