Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.2e-129 465.7 240 100.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.2e-124 449.9 232 100.0
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.1e-54 215.3 280 51.4
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 5.3e-51 205.3 283 47.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 7.6e-50 201.4 300 46.0
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 6.4e-49 198.4 300 43.7
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.9e-48 196.8 245 49.0
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 9.3e-48 194.5 300 43.0
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.6e-47 193.7 284 45.4
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 2.1e-47 193.4 245 51.0
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 2.1e-47 193.4 300 43.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 3.5e-47 192.6 283 43.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 3.9e-46 189.1 278 44.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 6.7e-46 188.3 283 44.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.7e-46 188.3 283 44.2
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 6.7e-46 188.3 300 44.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 6.7e-46 188.3 283 44.2
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.9e-45 186.8 283 44.5
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 3.3e-45 186.0 283 43.1
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 7.4e-45 184.9 283 43.5
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 7.4e-45 184.9 303 42.2
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 1.6e-44 183.7 318 41.5
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 2.1e-44 183.3 300 42.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 2.1e-44 183.3 299 42.8
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.8e-44 183.0 283 43.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 4.8e-44 182.2 300 42.0
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.8e-44 182.2 300 44.0
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.8e-44 182.2 300 43.7
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 6.2e-44 181.8 299 42.5
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 1.4e-43 180.6 300 40.7
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.8e-43 180.3 264 45.5
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 2.4e-43 179.9 283 43.5
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 3.1e-43 179.5 283 43.1
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.1e-43 179.5 300 43.3
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 5.3e-43 178.7 283 42.4
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 9.0e-43 177.9 300 42.0
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 9.0e-43 177.9 300 41.7
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 9.0e-43 177.9 301 42.2
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.5e-42 177.2 284 44.7
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 2.0e-42 176.8 283 43.1
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.0e-42 176.8 283 41.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 2.6e-42 176.4 283 43.1
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 2.6e-42 176.4 283 43.8
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 3.4e-42 176.0 284 43.0
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.4e-42 176.0 278 43.5
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 5.8e-42 175.3 284 43.0
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 7.6e-42 174.9 301 40.2
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 9.9e-42 174.5 283 42.8
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.3e-41 174.1 301 41.5
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.7e-41 173.7 283 41.7
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.7e-41 173.7 300 41.7
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 2.2e-41 173.3 283 43.1
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 2.2e-41 173.3 300 39.0
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.8e-41 172.6 284 41.9
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 6.4e-41 171.8 278 41.4
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 8.4e-41 171.4 337 38.9
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.1e-40 171.0 278 42.4
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.1e-40 171.0 278 42.1
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.4e-40 170.6 283 38.9
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.9e-40 170.2 281 42.0
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 3.2e-40 169.5 283 41.3
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 3.2e-40 169.5 283 40.6
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 4.2e-40 169.1 289 40.8
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 7.1e-40 168.3 256 43.0
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 7.1e-40 168.3 300 40.3
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 9.3e-40 167.9 283 42.8
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.6e-39 167.2 278 41.0
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 2.7e-39 166.4 283 41.0
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 4.6e-39 165.6 283 40.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 6.0e-39 165.2 282 41.1
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.0e-38 164.5 283 40.6
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.3e-38 164.1 283 39.9
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 3.0e-38 162.9 283 40.3
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.0e-38 162.9 283 39.9
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 3.0e-38 162.9 283 39.6
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 5.1e-38 162.2 342 38.3
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 8.7e-38 161.4 283 39.9
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 8.7e-38 161.4 283 39.9
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 8.7e-38 161.4 283 39.6
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 8.7e-38 161.4 283 39.6
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 8.7e-38 161.4 283 39.9
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.2e-36 155.2 278 39.2
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.2e-36 154.8 301 37.9
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.1e-35 154.5 263 43.3
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 2.6e-34 149.8 341 33.7
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.0e-33 147.9 344 35.5
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 2.9e-33 146.4 218 43.1
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.3e-32 141.4 178 50.6
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 5.7e-29 132.1 143 54.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 7.4e-29 131.7 289 35.3
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.3e-28 131.0 288 36.8
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.8e-27 127.1 301 33.6
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 5.3e-27 125.6 218 39.4
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 3.4e-26 122.9 143 52.4
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 2.1e-23 113.6 286 31.1
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 6.1e-23 112.1 133 51.9
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.0e-22 111.3 186 40.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.8e-22 110.5 192 39.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.2e-15 87.8 283 26.5
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.1e-15 87.0 332 26.2
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 3.6e-15 86.3 72 62.5
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 4.7e-15 85.9 69 63.8
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.0e-13 80.5 69 55.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 5.7e-13 79.0 301 27.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 9.7e-13 78.2 303 25.1
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 9.7e-13 78.2 275 27.3
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 2.4e-11 73.6 96 45.8
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.0e-09 68.2 108 46.3
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.3e-09 67.8 109 44.0
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.1e-08 64.7 298 24.2
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.6e-07 60.8 67 49.3


User provided reference genes

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