Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 2.1e-163 578.9 294 100.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 8.8e-125 450.7 294 77.9
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 7.2e-119 431.0 292 74.7
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.1e-118 429.5 294 74.1
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 2.3e-117 426.0 286 75.5
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 6.8e-117 424.5 297 72.7
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.3e-115 420.2 295 73.6
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.1e-114 417.2 303 72.6
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 2.4e-114 416.0 291 72.5
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 5.4e-114 414.8 300 72.0
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.6e-113 413.3 291 71.8
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.7e-113 412.5 297 70.4
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.0e-112 410.6 285 72.3
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.3e-112 410.2 291 71.8
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.7e-112 409.8 294 72.1
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 6.5e-112 407.9 291 71.1
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.2e-111 405.6 296 70.3
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 5.5e-111 404.8 281 73.0
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 9.4e-111 404.1 292 69.9
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.2e-110 403.7 292 71.6
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 2.1e-110 402.9 257 77.4
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 3.6e-110 402.1 283 74.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 8.0e-110 401.0 297 71.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 8.0e-110 401.0 282 73.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.4e-109 400.2 292 69.5
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.3e-109 399.4 282 72.0
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 3.0e-109 399.1 281 70.5
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 2.0e-108 396.4 298 68.1
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.4e-108 395.6 260 74.2
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 9.8e-108 394.0 291 68.4
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 4.9e-107 391.7 262 72.1
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 5.4e-106 388.3 266 73.3
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 5.4e-106 388.3 301 66.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 5.4e-106 388.3 283 70.3
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 1.2e-105 387.1 241 77.6
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.2e-105 387.1 293 68.6
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.2e-105 387.1 291 68.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.6e-105 386.7 288 66.3
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.7e-105 386.0 293 67.6
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.5e-105 385.2 290 68.3
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.3e-104 383.6 293 67.2
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.9e-103 379.8 303 66.7
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 2.5e-103 379.4 248 75.4
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.3e-103 379.0 285 68.8
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.3e-103 379.0 294 68.0
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.2e-102 377.1 273 69.2
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.1e-102 376.3 293 68.9
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.1e-102 376.3 290 67.2
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.7e-102 375.2 293 68.9
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 8.0e-102 374.4 272 69.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.8e-101 373.2 265 71.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 3.0e-101 372.5 315 62.9
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 4.0e-101 372.1 297 64.3
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 4.0e-101 372.1 297 64.3
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 5.2e-101 371.7 283 67.8
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 8.9e-101 370.9 291 64.9
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.5e-100 370.2 292 68.5
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.4e-100 369.0 285 66.0
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.7e-100 368.2 290 68.6
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 7.5e-100 367.9 298 66.1
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.5e-100 367.9 283 66.4
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 9.8e-100 367.5 287 68.3
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.9e-99 365.9 302 64.2
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 4.9e-99 365.2 262 70.2
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 8.3e-99 364.4 271 70.5
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 1.4e-98 363.6 260 71.9
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.4e-98 363.6 289 67.1
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 7.0e-98 361.3 285 66.7
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.7e-96 356.7 295 65.1
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 3.0e-96 355.9 288 66.3
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 3.0e-96 355.9 283 66.1
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 5.0e-96 355.1 271 69.0
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.5e-95 353.6 254 70.9
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.1e-94 349.7 269 68.0
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 6.2e-94 348.2 293 64.5
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 2.3e-93 346.3 238 71.8
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 8.9e-93 344.4 275 65.8
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 7.5e-92 341.3 292 63.7
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.3e-91 340.5 272 66.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 4.9e-91 338.6 267 68.2
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.1e-90 337.4 280 65.7
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.9e-90 336.7 242 71.5
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 5.4e-90 335.1 255 67.8
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-89 333.2 238 71.4
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 2.0e-89 333.2 224 75.0
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 2.1e-86 323.2 240 67.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 4.0e-85 318.9 235 67.2
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 2.6e-84 316.2 237 62.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 2.2e-83 313.2 235 66.8
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 2.7e-81 306.2 261 61.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 8.6e-80 301.2 202 74.3
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 7.3e-79 298.1 249 62.2
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.6e-78 297.0 216 70.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 1.1e-77 294.3 218 67.0
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.6e-73 278.9 292 53.1
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 2.8e-70 269.6 187 72.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 6.2e-62 241.9 227 55.5
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.1e-61 241.1 231 54.5
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.4e-59 231.5 293 49.8
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 7.4e-55 218.4 143 74.8
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 2.8e-54 216.5 227 46.3
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 5.8e-44 182.2 236 42.4
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.7e-43 180.6 248 45.6
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 8.7e-40 168.3 230 38.7
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 7.6e-36 155.2 244 39.8
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.3e-32 143.7 101 71.3
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 4.8e-30 136.0 230 38.7
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.4e-21 107.1 141 46.1
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.1e-21 105.1 85 56.5
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 8.5e-19 98.6 98 56.1
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.3e-14 84.7 54 74.1
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.7e-11 74.3 103 42.7
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 1.7e-11 74.3 62 54.8
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.5e-10 70.5 53 58.5
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 4.2e-10 69.7 70 55.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 4.2e-10 69.7 70 55.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.2e-09 68.2 70 54.3
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-08 63.9 51 56.9
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 9.7e-07 58.5 49 59.2
C03p46150 Brassica napus HOM05D024156 ORTHO05D027668 8.2e-06 55.5 52 59.6


User provided reference genes

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