Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22961 Nelumbo nucifera HOM05D001177 ORTHO05D001507 2.9e-137 491.9 244 100.0
Nn3g17055 Nelumbo nucifera HOM05D001177 ORTHO05D001507 2.8e-52 209.5 241 53.9
TAR629G0841 Trochodendron aralioides HOM05D001177 ORTHO05D001507 2.9e-33 146.4 187 50.8
TAR374G1481 Trochodendron aralioides HOM05D001177 ORTHO05D001507 1.5e-32 144.1 194 49.5
Dinv24928 Davidia involucrata HOM05D001177 ORTHO05D001507 7.5e-29 131.7 190 44.7
Dinv24929 Davidia involucrata HOM05D001177 ORTHO05D001507 7.5e-29 131.7 190 44.7
MD16G1083500 Malus domestica HOM05D001177 ORTHO05D001507 1.2e-26 124.4 194 44.8
Prupe.1G262500 Prunus persica HOM05D001177 ORTHO05D001507 1.6e-26 124.0 192 42.7
Duzib268G1843 Durio zibethinus HOM05D001177 ORTHO05D001507 1.9e-24 117.1 188 42.0
RcHm_v2.0_Chr4g0444941 Rosa chinensis HOM05D001177 ORTHO05D001507 3.3e-24 116.3 184 40.8
Ciclev10030976m.g Citrus clementina HOM05D001177 ORTHO05D001507 5.6e-24 115.5 228 38.2
COL.COLO4_36267 Corchorus olitorius HOM05D001177 ORTHO05D001507 9.5e-24 114.8 230 38.3
CANSAT01G0816 Cannabis sativa HOM05D001177 ORTHO05D001507 1.2e-23 114.4 189 43.4
FvH4_4g35330 Fragaria vesca HOM05D001177 ORTHO05D001507 1.2e-23 114.4 185 41.6
Haze_12113 Corylus avellana HOM05D001177 ORTHO05D001507 2.8e-23 113.2 230 40.4
FAN12G0036 Fragaria x ananassa HOM05D001177 ORTHO05D001507 3.6e-23 112.8 188 41.5
CiPaw.05G144100 Carya illinoinensis HOM05D001177 ORTHO05D001507 1.1e-22 111.3 188 46.3
Cfa009081 Carpinus fangiana HOM05D001177 ORTHO05D001507 1.8e-22 110.5 230 40.4
FAN22G1475 Fragaria x ananassa HOM05D001177 ORTHO05D001507 4.0e-22 109.4 185 40.0
Hma1.2p1_0289F.1_g114520 Hydrangea macrophylla HOM05D001177 ORTHO05D001507 4.0e-22 109.4 187 40.1
FAN07G0676 Fragaria x ananassa HOM05D001177 ORTHO05D001507 5.2e-22 109.0 189 41.3
FAN17G0702 Fragaria x ananassa HOM05D001177 ORTHO05D001507 1.2e-21 107.8 185 40.0
Glyma.01G038500 Glycine max HOM05D001177 ORTHO05D001507 3.4e-21 106.3 196 40.3
Cc11_g13950 Coffea canephora HOM05D001177 ORTHO05D001507 4.4e-21 105.9 196 39.3
Cpa.g.sc5.316 Carica papaya HOM05D001177 ORTHO05D001507 9.8e-21 104.8 186 39.2
CsaV3_5G032020 Cucumis sativus L. HOM05D001177 ORTHO05D001507 1.3e-20 104.4 201 41.3
Atru.chr11.1923 Acer truncatum HOM05D001177 ORTHO05D001507 2.2e-20 103.6 240 36.7
Lsat_1_v5_gn_3_49241 Lactuca sativa HOM05D001177 ORTHO05D001507 2.9e-20 103.2 182 39.0
Gohir.D05G322200 Gossypium hirsutum HOM05D001177 ORTHO05D001507 4.9e-20 102.4 188 39.9
Gorai.009G345800 Gossypium raimondii HOM05D001177 ORTHO05D001507 4.9e-20 102.4 188 39.9
Manes.01G194200 Manihot esculenta HOM05D001177 ORTHO05D001507 6.4e-20 102.1 188 38.3
ClCG05G024890 Citrullus lanatus HOM05D001177 ORTHO05D001507 8.3e-20 101.7 200 40.5
Phvul.002G078300 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 8.3e-20 101.7 201 38.3
Gohir.A05G319900 Gossypium hirsutum HOM05D001177 ORTHO05D001507 1.4e-19 100.9 188 39.9
MELO3C012037.2 Cucumis melo HOM05D001177 ORTHO05D001507 2.4e-19 100.1 200 40.5
MSTRG.13392 Avicennia marina HOM05D001177 ORTHO05D001507 7.0e-19 98.6 194 40.7
Lj2g0005552 Lotus japonicus HOM05D001177 ORTHO05D001507 7.0e-19 98.6 177 40.1
Sed0000420 Sechium edule HOM05D001177 ORTHO05D001507 1.2e-18 97.8 192 40.1
Actinidia08195 Actinidia chinensis HOM05D001177 ORTHO05D001507 1.6e-18 97.4 191 39.3
MSTRG.2371 Avicennia marina HOM05D001177 ORTHO05D001507 1.6e-18 97.4 189 37.6
Aqoxy3G03166 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 2.7e-18 96.7 189 40.7
Ca_05076_v3 Cicer arietinum L. HOM05D001177 ORTHO05D001507 6.0e-18 95.5 240 33.8
Eucgr.B03384 Eucalyptus grandis HOM05D001177 ORTHO05D001507 6.0e-18 95.5 193 39.4
PGR102G2564 Punica granatum HOM05D001177 ORTHO05D001507 7.8e-18 95.1 206 37.4
CSS0027221 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 1.3e-17 94.4 193 38.3
CSS0044035 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D001507 1.3e-17 94.4 193 38.3
VMungo1215G1136 Vigna mungo HOM05D001177 ORTHO05D001507 1.3e-17 94.4 197 36.5
GSVIVG01020134001 Vitis vinifera HOM05D001177 ORTHO05D001507 1.7e-17 94.0 156 42.9
Manes.05G093600 Manihot esculenta HOM05D001177 ORTHO05D001507 2.3e-17 93.6 180 37.8
Oeu015871.1 Olea europaea HOM05D001177 ORTHO05D001507 2.3e-17 93.6 196 36.2
Rhsim12G0052400 Rhododendron simsii HOM05D001177 ORTHO05D001507 2.3e-17 93.6 173 38.2
Sc11g0001500 Simmondsia chinensis HOM05D001177 ORTHO05D001507 3.0e-17 93.2 173 37.6
Glyma.02G026500 Glycine max HOM05D001177 ORTHO05D001507 3.9e-17 92.8 196 38.3
Lalb_Chr16g0382611 Lupinus albus HOM05D001177 ORTHO05D001507 6.6e-17 92.0 193 37.8
CAN.G1694.2 Capsicum annuum HOM05D001177 ORTHO05D001507 3.3e-16 89.7 191 36.6
THA.LOC104822073 Tarenaya hassleriana HOM05D001177 ORTHO05D001507 1.6e-15 87.4 203 34.5
EL10Ac6g13090 Beta vulgaris HOM05D001177 ORTHO05D001507 2.8e-15 86.7 224 33.0
PSO832G0304 Papaver somniferum HOM05D001177 ORTHO05D001507 2.8e-15 86.7 191 39.8
Peaxi162Scf00828g10023 Petunia axillaris HOM05D001177 ORTHO05D001507 2.8e-15 86.7 196 37.8
Migut.E00129 Erythranthe guttata HOM05D001177 ORTHO05D001507 3.6e-15 86.3 184 38.0
Lalb_Chr09g0326591 Lupinus albus HOM05D001177 ORTHO05D001507 3.6e-15 86.3 200 38.5
Nitab4.5_0001030g0100 Nicotiana tabacum HOM05D001177 ORTHO05D001507 4.7e-15 85.9 180 36.1
Solyc05g006560.1 Solanum lycopersicum HOM05D001177 ORTHO05D001507 1.1e-14 84.7 192 36.5
QL03p067497 Quercus lobata HOM05D001177 ORTHO05D001507 1.4e-14 84.3 166 39.8
PGSC0003DMG400022633 Solanum tuberosum HOM05D001177 ORTHO05D001507 1.4e-14 84.3 189 35.4
TWI36G1408 Tripterygium wilfordii HOM05D001177 ORTHO05D001507 1.4e-14 84.3 202 37.6
Aqoxy3G00857 Aquilegia oxysepala HOM05D001177 ORTHO05D001507 1.8e-14 84.0 190 36.3
Migut.L01373 Erythranthe guttata HOM05D001177 ORTHO05D001507 1.8e-14 84.0 194 38.1
PSO591G0450 Papaver somniferum HOM05D001177 ORTHO05D001507 1.8e-14 84.0 158 39.9
SGA_v2.0_scaffold87G26990 Striga asiatica HOM05D001177 ORTHO05D001507 1.8e-14 84.0 186 35.5
MSTRG.7849 Avicennia marina HOM05D001177 ORTHO05D001507 2.3e-14 83.6 189 36.5
Sopen05g002510 Solanum pennellii HOM05D001177 ORTHO05D001507 4.0e-14 82.8 196 35.7
TPR.G26705 Trifolium pratense HOM05D001177 ORTHO05D001507 4.0e-14 82.8 196 33.7
THA.LOC104822944 Tarenaya hassleriana HOM05D001177 ORTHO05D001507 5.2e-14 82.4 199 35.2
Sabra10G0027400 Salix brachista HOM05D001177 ORTHO05D001507 6.8e-14 82.0 187 34.8
Hund05936 Selenicereus undatus HOM05D001177 ORTHO05D001507 1.2e-13 81.3 194 35.6
Potri.008G192000 Populus trichocarpa HOM05D001177 ORTHO05D001507 2.0e-13 80.5 189 34.9
Psat2g114760 Pisum sativum HOM05D001177 ORTHO05D001507 2.6e-13 80.1 216 33.3
TWI75G1660 Tripterygium wilfordii HOM05D001177 ORTHO05D001507 2.6e-13 80.1 233 34.8
Sabra08G0145500 Salix brachista HOM05D001177 ORTHO05D001507 3.4e-13 79.7 189 34.4
BraA09t39558Z Brassica rapa HOM05D001177 ORTHO05D001507 5.8e-13 79.0 184 34.8
Potri.010G039000 Populus trichocarpa HOM05D001177 ORTHO05D001507 5.8e-13 79.0 187 34.8
BcaB07g32396 Brassica carinata HOM05D001177 ORTHO05D001507 7.5e-13 78.6 185 36.2
DCAR_024504 Daucus carota HOM05D001177 ORTHO05D001507 1.3e-12 77.8 188 34.6
SGA_v2.0_scaffold166G38307 Striga asiatica HOM05D001177 ORTHO05D001507 1.7e-12 77.4 190 33.7
Aa31LG7G7990 Aethionema arabicum HOM05D001177 ORTHO05D001507 2.2e-12 77.0 159 39.0
Medtr5g037020 Medicago truncatula HOM05D001177 ORTHO05D001507 2.2e-12 77.0 232 31.0
A09p40620 Brassica napus HOM05D001177 ORTHO05D001507 3.7e-12 76.3 184 34.2
Thhalv10007185m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 6.4e-12 75.5 186 33.9
Nn3g19422 Nelumbo nucifera HOM05D001177 ORTHO05D001507 6.4e-12 75.5 39 87.2
BcaC05g26335 Brassica carinata HOM05D001177 ORTHO05D001507 1.1e-11 74.7 180 33.9
BolC5t31056H Brassica oleracea HOM05D001177 ORTHO05D001507 1.1e-11 74.7 180 33.9
C05p23440 Brassica napus HOM05D001177 ORTHO05D001507 1.4e-11 74.3 180 33.9
CARHR024640 Cardamine hirsuta HOM05D001177 ORTHO05D001507 3.2e-11 73.2 158 34.2
SHI20713 Sapria himalayana HOM05D001177 ORTHO05D001507 3.2e-11 73.2 183 33.3
AUR62026531 Chenopodium quinoa HOM05D001177 ORTHO05D001507 4.1e-11 72.8 104 37.5
Ah.02g131670 Amaranthus hybridus HOM05D001177 ORTHO05D001507 9.2e-11 71.6 134 35.1
AT1G27200 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 9.2e-11 71.6 157 32.5
A08p27820 Brassica napus HOM05D001177 ORTHO05D001507 1.6e-10 70.9 184 31.5
BraA08t34714Z Brassica rapa HOM05D001177 ORTHO05D001507 1.6e-10 70.9 184 31.5
HanXRQChr07g0203371 Helianthus annuus HOM05D001177 ORTHO05D001507 1.6e-10 70.9 182 34.6
Glyma.18G130100 Glycine max HOM05D001177 ORTHO05D001507 2.1e-10 70.5 225 32.4
Carub.0001s2376 Capsella rubella HOM05D001177 ORTHO05D001507 3.5e-10 69.7 186 31.7
Phvul.003G072900 Phaseolus vulgaris HOM05D001177 ORTHO05D001507 6.0e-10 68.9 162 33.3
VMungo0251G2894 Vigna mungo HOM05D001177 ORTHO05D001507 7.8e-10 68.6 181 36.5
AL1G38250 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 1.0e-09 68.2 136 33.8
Lsat_1_v5_gn_8_161801 Lactuca sativa HOM05D001177 ORTHO05D001507 1.0e-09 68.2 114 38.6
Ah.03g132110 Amaranthus hybridus HOM05D001177 ORTHO05D001507 1.7e-09 67.4 234 30.8
Duzib248G0839 Durio zibethinus HOM05D001177 ORTHO05D001507 1.7e-09 67.4 105 36.2
Sp1g21570 Schrenkiella parvula HOM05D001177 ORTHO05D001507 2.3e-09 67.0 158 34.2
BcaB03g11972 Brassica carinata HOM05D001177 ORTHO05D001507 5.6e-08 62.4 156 31.4
ATR0712G160 Amborella trichopoda HOM05D001177 ORTHO05D001507 1.2e-07 61.2 172 32.6
BcaC07g39241 Brassica carinata HOM05D001177 ORTHO05D001507 1.2e-07 61.2 186 31.2
Glyma.08G293200 Glycine max HOM05D001177 ORTHO05D001507 1.2e-07 61.2 177 32.2
C08p22460 Brassica napus HOM05D001177 ORTHO05D001507 2.1e-07 60.5 184 31.0
Thecc.02G238200 Theobroma cacao HOM05D001177 ORTHO05D001507 3.6e-07 59.7 76 39.5
TAR622G0035 Trochodendron aralioides HOM05D001177 ORTHO05D001507 4.7e-07 59.3 162 29.0
Nn4g22454 Nelumbo nucifera HOM05D001177 ORTHO05D001507 2.4e-06 57.0 163 31.9
MBI11_g32914_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D001507 4.0e-06 56.2 181 29.3
BolC8t49880H Brassica oleracea HOM05D001177 ORTHO05D001507 5.2e-06 55.8 171 31.0


User provided reference genes

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