Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.6e-32 142.1 72 100.0
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 5.8e-22 107.1 64 85.9
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 5.8e-22 107.1 63 85.7
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.3e-21 105.9 66 80.3
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 5.0e-21 104.0 63 79.4
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.4e-20 102.4 63 81.0
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.9e-20 102.1 63 77.8
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.9e-20 102.1 63 81.0
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 2.5e-20 101.7 60 85.0
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 2.5e-20 101.7 63 79.4
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 7.1e-20 100.1 63 77.8
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 7.1e-20 100.1 63 77.8
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 7.1e-20 100.1 63 79.4
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.3e-20 99.8 63 81.0
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 2.7e-19 98.2 63 77.8
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 3.5e-19 97.8 60 81.7
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.6e-19 97.4 60 78.3
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 4.6e-19 97.4 60 80.0
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 4.6e-19 97.4 60 78.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 4.6e-19 97.4 60 78.3
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 7.9e-19 96.7 60 80.0
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 7.9e-19 96.7 60 80.0
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 7.9e-19 96.7 60 78.3
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.0e-18 96.3 63 74.6
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-18 96.3 60 73.3
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-18 96.3 60 73.3
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 1.0e-18 96.3 60 80.0
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.3e-18 95.9 60 78.3
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.8e-18 95.5 64 75.0
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.3e-18 95.1 63 76.2
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 2.3e-18 95.1 60 75.0
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 2.3e-18 95.1 60 76.7
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 2.3e-18 95.1 60 76.7
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 2.3e-18 95.1 53 88.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 2.3e-18 95.1 63 74.6
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 2.3e-18 95.1 63 74.6
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.0e-18 94.7 60 78.3
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 3.9e-18 94.4 60 76.7
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.9e-18 94.4 63 76.2
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 6.7e-18 93.6 60 78.3
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 8.7e-18 93.2 59 83.1
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 8.7e-18 93.2 60 73.3
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.1e-17 92.8 60 76.7
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.1e-17 92.8 63 77.8
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.5e-17 92.4 56 82.1
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.9e-17 92.0 60 75.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.5e-17 91.7 56 82.1
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 4.3e-17 90.9 56 78.6
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 4.3e-17 90.9 56 78.6
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 4.3e-17 90.9 56 78.6
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 4.3e-17 90.9 57 77.2
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 5.7e-17 90.5 52 86.5
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.7e-17 90.5 60 71.7
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 5.7e-17 90.5 54 83.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 7.4e-17 90.1 60 78.3
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 7.4e-17 90.1 56 76.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 7.4e-17 90.1 60 73.3
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 7.4e-17 90.1 53 81.1
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 78.6
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 78.6
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 78.6
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 78.6
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 78.6
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 9.7e-17 89.7 60 73.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 9.7e-17 89.7 60 73.3
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 9.7e-17 89.7 56 76.8
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.3e-16 89.4 60 73.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.3e-16 89.4 60 73.3
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.3e-16 89.4 60 71.7
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.3e-16 89.4 56 76.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.6e-16 89.0 56 75.0
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.6e-16 89.0 56 78.6
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.6e-16 89.0 50 90.0
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 1.6e-16 89.0 50 90.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.6e-16 89.0 60 73.3
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.2e-16 88.6 54 81.5
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 2.8e-16 88.2 56 76.8
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 2.8e-16 88.2 56 75.0
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.8e-16 88.2 57 75.4
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 3.7e-16 87.8 60 71.7
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 3.7e-16 87.8 63 66.7
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 4.8e-16 87.4 60 73.3
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.8e-16 87.4 60 71.7
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.8e-16 87.4 60 71.7
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 6.3e-16 87.0 72 65.3
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 6.3e-16 87.0 60 73.3
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 6.3e-16 87.0 60 68.3
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 8.2e-16 86.7 60 73.3
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 8.2e-16 86.7 60 68.3
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.1e-15 86.3 60 65.0
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.8e-15 85.5 60 66.7
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 5.3e-15 84.0 83 57.8
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 1.2e-14 82.8 57 71.9
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 3.4e-14 81.3 60 63.3
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 3.4e-14 81.3 46 89.1
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.9e-14 80.5 60 65.0
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 5.9e-14 80.5 68 64.7
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 7.7e-14 80.1 58 75.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.2e-13 78.6 61 68.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.9e-12 75.5 79 54.4
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 7.2e-12 73.6 55 63.6
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.6e-11 72.4 49 73.5
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 7.9e-11 70.1 60 63.3
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 3.9e-10 67.8 39 89.7
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.9e-10 67.8 138 35.5
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 5.1e-10 67.4 52 63.5
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 6.7e-10 67.0 35 94.3
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 6.7e-10 67.0 105 40.0
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 4.3e-09 64.3 35 94.3
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 7.4e-09 63.5 133 33.8
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.3e-08 62.8 54 61.1
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.7e-08 62.4 63 54.0
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.8e-08 61.6 61 54.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 4.8e-08 60.8 36 83.3
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 8.2e-08 60.1 42 73.8
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.1e-07 59.7 36 83.3
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.4e-07 59.3 54 51.9
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 4.5e-06 54.3 52 51.9


User provided reference genes

Program Settings