Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 4.0e-151 538.1 278 100.0
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 5.8e-102 374.8 297 67.7
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 3.5e-91 339.0 292 64.7
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 1.3e-85 320.5 291 60.8
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.7e-85 320.1 294 59.9
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.8e-85 318.9 303 59.7
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 6.4e-85 318.2 303 57.8
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.4e-84 317.0 287 61.0
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.2e-84 315.8 302 56.0
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.2e-84 315.5 302 56.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 4.2e-84 315.5 302 56.3
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 5.5e-84 315.1 282 59.2
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.2e-83 313.9 302 55.6
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 6.0e-83 311.6 278 60.4
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.8e-82 310.1 285 60.0
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 3.9e-82 308.9 276 61.6
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 6.7e-82 308.1 259 60.2
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.5e-81 307.0 286 58.7
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 1.5e-81 307.0 277 60.6
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.9e-81 306.6 286 59.1
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.5e-81 306.2 299 57.5
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 3.3e-81 305.8 305 58.4
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 4.3e-81 305.4 259 63.3
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 7.4e-81 304.7 300 57.3
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 9.6e-81 304.3 295 55.3
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 9.6e-81 304.3 230 68.3
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.3e-80 303.9 280 60.0
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 2.8e-80 302.8 259 61.8
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 3.7e-80 302.4 296 58.1
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.2e-80 301.6 336 50.3
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.2e-80 301.6 310 53.5
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.4e-79 300.4 296 57.8
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 2.4e-79 299.7 258 60.9
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 6.9e-79 298.1 253 62.5
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 6.9e-79 298.1 310 56.5
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.2e-78 297.4 260 61.2
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 1.2e-78 297.4 237 66.2
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.4e-78 295.8 241 63.9
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 1.0e-77 294.3 290 57.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 2.2e-77 293.1 261 59.8
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.9e-77 292.7 296 58.1
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 2.9e-77 292.7 231 65.8
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.8e-77 292.4 253 61.3
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 8.4e-77 291.2 274 59.1
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.4e-76 290.4 234 64.5
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.5e-76 289.7 274 59.5
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 3.2e-76 289.3 264 60.6
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.5e-76 288.5 260 59.6
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 7.1e-76 288.1 242 62.8
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.2e-75 287.3 300 55.0
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 3.5e-75 285.8 303 54.8
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 7.9e-75 284.6 296 53.7
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.0e-74 284.3 235 60.9
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.3e-74 283.9 236 63.1
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.8e-74 283.5 242 62.4
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 2.3e-74 283.1 291 55.7
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 3.0e-74 282.7 271 57.6
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 3.9e-74 282.3 289 54.3
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 6.7e-74 281.6 271 57.2
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 8.7e-74 281.2 234 62.4
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 1.5e-73 280.4 292 54.8
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 1.9e-73 280.0 235 62.6
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 2.5e-73 279.6 284 53.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 4.3e-73 278.9 282 53.9
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.3e-72 277.3 283 55.5
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.8e-72 276.2 304 53.0
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 4.8e-72 275.4 294 52.4
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 6.3e-72 275.0 258 56.2
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 6.3e-72 275.0 258 56.2
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 6.3e-72 275.0 258 56.2
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 1.1e-71 274.2 232 60.3
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 1.1e-71 274.2 232 60.3
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 5.3e-71 271.9 232 59.9
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 5.3e-71 271.9 236 61.4
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 6.9e-71 271.6 245 58.4
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 9.0e-71 271.2 243 58.8
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.5e-70 270.4 243 58.4
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 2.6e-70 269.6 242 57.9
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.6e-70 269.6 226 61.1
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.6e-70 269.6 226 61.1
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 3.4e-70 269.2 242 57.9
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 7.7e-70 268.1 238 58.8
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.0e-69 267.7 232 59.1
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.3e-69 267.3 258 57.0
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.3e-69 267.3 258 55.8
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.3e-69 267.3 305 51.8
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.7e-69 266.9 252 56.7
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 5.0e-69 265.4 293 51.5
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.1e-68 264.2 352 48.0
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.4e-68 263.8 258 55.8
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.2e-68 262.7 235 60.4
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 7.2e-68 261.5 236 58.5
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.2e-67 260.8 230 59.1
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 4.6e-67 258.8 221 59.3
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 7.9e-67 258.1 276 52.2
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.1e-65 254.2 258 55.8
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.0e-65 253.4 230 58.3
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 3.3e-65 252.7 257 57.2
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 9.7e-65 251.1 249 53.8
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.9e-52 210.3 239 52.3
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 2.1e-51 206.8 221 52.5
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 6.1e-51 205.3 176 62.5
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 8.8e-50 201.4 208 53.8
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 4.1e-39 166.0 133 65.4
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.8e-34 150.6 194 43.8
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 4.4e-33 146.0 193 42.5
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.8e-31 140.6 246 38.6
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 2.3e-29 133.7 151 51.7
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 2.5e-28 130.2 201 38.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 5.5e-28 129.0 198 39.4
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 6.1e-27 125.6 81 72.8
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 2.3e-26 123.6 87 71.3
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.3e-26 123.6 178 43.3
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 5.7e-25 119.0 198 39.4
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.6e-22 110.9 133 49.6
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 3.5e-22 109.8 102 55.9
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 5.9e-22 109.0 74 71.6
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 4.3e-20 102.8 117 49.6
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 2.0e-14 84.0 87 50.6
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 4.0e-10 69.7 101 40.6


User provided reference genes

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