Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 6.3e-67 257.3 130 100.0
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 2.9e-43 178.7 127 73.2
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 3.6e-22 108.6 128 50.8
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 8.1e-22 107.5 133 51.1
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 2.4e-21 105.9 123 48.8
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 5.2e-21 104.8 101 56.4
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 9.9e-20 100.5 122 52.5
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 2.9e-19 99.0 104 55.8
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 2.9e-19 99.0 132 47.0
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 8.4e-19 97.4 110 54.5
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 2.4e-18 95.9 148 45.3
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 3.2e-18 95.5 108 53.7
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 1.2e-17 93.6 79 59.5
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 2.7e-17 92.4 151 44.4
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 7.8e-17 90.9 148 44.6
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.0e-16 90.5 122 46.7
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 1.3e-16 90.1 142 41.5
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 2.3e-16 89.4 118 49.2
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 3.0e-16 89.0 118 50.0
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 3.0e-16 89.0 116 47.4
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-15 87.0 130 47.7
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.1e-15 87.0 130 47.7
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.5e-15 86.7 118 51.7
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.9e-15 86.3 118 51.7
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 1.9e-15 86.3 140 44.3
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 5.6e-15 84.7 105 50.5
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 9.6e-15 84.0 135 46.7
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 9.6e-15 84.0 90 53.3
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 9.6e-15 84.0 68 64.7
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 1.3e-14 83.6 121 43.8
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 1.6e-14 83.2 142 42.3
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 2.1e-14 82.8 113 47.8
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-14 82.4 129 46.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 2.8e-14 82.4 124 46.0
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 3.6e-14 82.0 113 47.8
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 8.1e-14 80.9 119 42.0
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 8.1e-14 80.9 142 42.3
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 1.4e-13 80.1 97 49.5
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.4e-13 79.3 144 43.1
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 4.0e-13 78.6 143 43.4
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 4.0e-13 78.6 143 43.4
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 6.9e-13 77.8 100 48.0
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 6.9e-13 77.8 102 47.1
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 9.0e-13 77.4 118 44.1
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 9.0e-13 77.4 143 42.7
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.2e-12 77.0 100 48.0
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 1.2e-12 77.0 144 45.1
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.5e-12 76.6 104 45.2
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 2.0e-12 76.3 109 45.0
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.4e-12 75.5 142 42.3
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 4.4e-12 75.1 133 39.1
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 5.8e-12 74.7 111 44.1
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 5.8e-12 74.7 115 42.6
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 5.8e-12 74.7 134 38.8
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 7.6e-12 74.3 101 44.6
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 9.9e-12 73.9 106 49.1
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 1.3e-11 73.6 69 56.5
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 1.7e-11 73.2 91 50.5
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 1.7e-11 73.2 99 47.5
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 2.9e-11 72.4 106 44.3
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 2.9e-11 72.4 102 44.1
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 2.9e-11 72.4 138 37.0
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 4.9e-11 71.6 105 46.7
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 1.1e-10 70.5 122 42.6
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 1.4e-10 70.1 107 43.9
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 2.4e-10 69.3 138 38.4
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 2.4e-10 69.3 138 38.4
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 2.4e-10 69.3 93 46.2
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 2.4e-10 69.3 132 37.9
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 3.2e-10 68.9 86 46.5
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 3.2e-10 68.9 62 56.5
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 7.1e-10 67.8 105 42.9
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 1.2e-09 67.0 143 38.5
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 1.2e-09 67.0 111 44.1
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.6e-09 66.6 80 50.0
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 1.6e-09 66.6 85 45.9
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 2.1e-09 66.2 84 45.2
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 2.7e-09 65.9 151 39.1
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 3.5e-09 65.5 79 50.6
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 3.5e-09 65.5 117 43.6
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 6.0e-09 64.7 49 63.3
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 7.8e-09 64.3 136 39.7
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 1.0e-08 63.9 85 45.9
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 1.7e-08 63.2 53 64.2
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 1.7e-08 63.2 119 37.8
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 1.7e-08 63.2 135 33.3
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 3.9e-08 62.0 121 39.7
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 3.9e-08 62.0 93 45.2
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 3.9e-08 62.0 136 34.6
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 3.9e-08 62.0 71 50.7
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 3.9e-08 62.0 87 48.3
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 5.1e-08 61.6 98 41.8
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 8.7e-08 60.8 64 50.0
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 8.7e-08 60.8 104 40.4
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 8.7e-08 60.8 86 44.2
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 8.7e-08 60.8 86 44.2
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 1.5e-07 60.1 67 52.2
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 1.9e-07 59.7 132 35.6
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 3.3e-07 58.9 87 44.8
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 3.3e-07 58.9 87 44.8
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 3.3e-07 58.9 87 44.8
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 5.6e-07 58.2 71 46.5
unitig_8.g3942 Utricularia gibba HOM05D007558 ORTHO05D009245 7.3e-07 57.8 109 37.6
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 9.6e-07 57.4 112 35.7
A07p36840 Brassica napus HOM05D008527 ORTHO05D010701 1.3e-06 57.0 124 39.5
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 1.3e-06 57.0 137 32.8
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 1.6e-06 56.6 64 45.3
Sed0023819 Sechium edule HOM05D007558 ORTHO05D009245 1.6e-06 56.6 97 39.2
AL2G29840 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 2.1e-06 56.2 116 37.9
BcaB03g14805 Brassica carinata HOM05D008527 ORTHO05D010701 2.1e-06 56.2 84 42.9
BraA07t31250Z Brassica rapa HOM05D008527 ORTHO05D010701 2.1e-06 56.2 84 42.9
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 2.1e-06 56.2 64 46.9
Thhalv10019272m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 4.8e-06 55.1 114 38.6


User provided reference genes

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