Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22664 Nelumbo nucifera HOM05D001033 ORTHO05D005438 2.7e-39 164.9 82 100.0
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 1.3e-22 109.4 58 91.4
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.8e-22 109.0 58 89.7
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 2.3e-22 108.6 57 91.2
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.9e-22 107.8 58 89.7
Gohir.A10G087950 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.9e-22 107.8 58 89.7
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.9e-22 107.8 58 89.7
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 3.9e-22 107.8 58 89.7
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 5.1e-22 107.5 58 87.9
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 5.1e-22 107.5 58 87.9
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 1.5e-21 105.9 58 86.2
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 1.5e-21 105.9 58 87.9
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 1.9e-21 105.5 58 86.2
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 1.9e-21 105.5 58 86.2
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.5e-21 105.1 58 86.2
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.5e-21 105.1 58 86.2
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.5e-21 105.1 58 86.2
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 2.5e-21 105.1 58 86.2
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 2.5e-21 105.1 58 86.2
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 7.4e-21 103.6 58 84.5
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 7.4e-21 103.6 58 84.5
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 7.4e-21 103.6 57 87.7
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 7.4e-21 103.6 57 87.7
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 9.6e-21 103.2 58 86.2
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 9.6e-21 103.2 57 86.0
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 9.6e-21 103.2 58 82.8
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 9.6e-21 103.2 58 82.8
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 9.6e-21 103.2 58 82.8
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 1.3e-20 102.8 58 84.5
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 1.3e-20 102.8 57 86.0
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 1.6e-20 102.4 57 86.0
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 1.6e-20 102.4 57 86.0
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 1.6e-20 102.4 57 86.0
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 1.6e-20 102.4 57 86.0
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr04g0118141 Helianthus annuus HOM05D001033 ORTHO05D005438 1.6e-20 102.4 57 86.0
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 1.6e-20 102.4 57 86.0
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.1e-20 102.1 58 86.2
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 2.8e-20 101.7 57 84.2
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 4.8e-20 100.9 58 82.8
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 4.8e-20 100.9 57 84.2
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 6.2e-20 100.5 57 84.2
C04p22580 Brassica napus HOM05D001033 ORTHO05D005438 8.1e-20 100.1 58 82.8
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 6.9e-19 97.1 57 80.7
Gohir.D07G155048 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.0e-18 95.5 53 83.0
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 2.2e-17 92.0 75 68.0
Medtr3g035740 Medicago truncatula HOM05D001033 ORTHO05D005438 4.6e-15 84.3 45 88.9
BNapus_Darmor_BZH_scaffold_253p00180 Brassica napus HOM05D001033 ORTHO05D005438 1.8e-14 82.4 46 84.8
Gohir.D12G053450 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.5e-13 79.3 58 72.4
BNapus_Darmor_BZH_scaffold_287p00100 Brassica napus HOM05D001033 ORTHO05D005438 3.3e-13 78.2 53 71.7
Gohir.D05G268250 Gossypium hirsutum HOM05D001033 ORTHO05D005438 7.6e-10 67.0 42 78.6
Gorai.009G280700 Gossypium raimondii HOM05D001033 ORTHO05D005438 1.7e-09 65.9 42 76.2
Gorai.013G158200 Gossypium raimondii HOM05D001033 ORTHO05D005438 3.8e-09 64.7 36 86.1
Lalb_Chr01g0022761 Lupinus albus HOM05D001033 ORTHO05D005438 5.0e-09 64.3 33 87.9
PGSC0003DMG400015304 Solanum tuberosum HOM05D001033 ORTHO05D005438 8.4e-09 63.5 33 87.9
Oeu015831.1 Olea europaea HOM05D001033 ORTHO05D005438 2.5e-08 62.0 32 90.6
SMO086G0042 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 2.5e-08 62.0 57 56.1
SMO086G0053 Selaginella moellendorffii HOM05D001033 ORTHO05D005438 2.5e-08 62.0 57 56.1
Migut.D01355 Erythranthe guttata HOM05D001033 ORTHO05D005438 1.2e-07 59.7 33 84.8
Nitab4.5_0005637g0100 Nicotiana tabacum HOM05D001033 ORTHO05D002045 1.2e-07 59.7 33 81.8
Gohir.A07G060600 Gossypium hirsutum HOM05D001033 ORTHO05D005438 6.1e-07 57.4 33 84.8
SHI52150 Sapria himalayana HOM05D001325 ORTHO05D001540 1.0e-06 56.6 46 50.0
SHI54131 Sapria himalayana HOM05D001325 ORTHO05D001540 1.0e-06 56.6 46 50.0
Potri.007G062001 Populus trichocarpa HOM05D001325 ORTHO05D005438 1.3e-06 56.2 52 48.1
SHI54219 Sapria himalayana HOM05D001325 ORTHO05D001540 3.9e-06 54.7 46 52.2
HanXRQChr14g0454411 Helianthus annuus HOM05D001033 ORTHO05D005438 5.1e-06 54.3 48 58.3
SHI39777 Sapria himalayana HOM05D001325 ORTHO05D001540 5.1e-06 54.3 46 50.0
Nitab4.5_0002149g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.7e-06 53.9 29 86.2
SHI34630 Sapria himalayana HOM05D001325 ORTHO05D001540 8.7e-06 53.5 46 50.0
SHI50625 Sapria himalayana HOM05D001325 ORTHO05D001540 8.7e-06 53.5 46 50.0


User provided reference genes

Program Settings