Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 1.2e-82 309.7 149 100.0
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 5.1e-28 128.3 131 55.0
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 1.1e-25 120.6 133 51.9
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 5.2e-25 118.2 142 52.1
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 6.9e-25 117.9 131 53.4
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 6.9e-25 117.9 131 53.4
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 3.4e-24 115.5 123 54.5
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 5.8e-24 114.8 130 51.5
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 7.6e-24 114.4 128 53.1
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 7.6e-24 114.4 123 53.7
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 7.6e-24 114.4 123 53.7
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 9.9e-24 114.0 131 50.4
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 9.9e-24 114.0 131 50.4
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 9.9e-24 114.0 131 50.4
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 9.9e-24 114.0 130 50.0
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 2.9e-23 112.5 132 50.8
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 3.8e-23 112.1 132 50.8
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 1.4e-22 110.2 125 53.6
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 1.4e-22 110.2 123 58.5
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 2.4e-22 109.4 131 51.1
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 3.2e-22 109.0 137 52.6
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 3.2e-22 109.0 119 52.1
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 4.2e-22 108.6 138 47.1
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 5.4e-22 108.2 131 48.1
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 9.3e-22 107.5 137 48.9
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 1.2e-21 107.1 137 51.8
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 2.7e-21 105.9 132 47.7
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 3.5e-21 105.5 132 49.2
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 4.6e-21 105.1 131 48.9
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 6.0e-21 104.8 133 48.9
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 7.8e-21 104.4 131 45.8
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.7e-20 103.2 131 48.9
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 3.0e-20 102.4 137 48.2
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 3.9e-20 102.1 115 54.8
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 5.1e-20 101.7 123 53.7
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 8.7e-20 100.9 132 47.7
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 8.7e-20 100.9 141 45.4
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.1e-19 100.5 141 47.5
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 1.1e-19 100.5 144 47.2
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 1.1e-19 100.5 130 49.2
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 1.9e-19 99.8 124 48.4
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 3.3e-19 99.0 124 50.0
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 3.3e-19 99.0 129 48.1
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 3.3e-19 99.0 131 43.5
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 3.3e-19 99.0 146 43.8
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 4.3e-19 98.6 123 51.2
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 4.3e-19 98.6 137 48.9
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 4.3e-19 98.6 134 45.5
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 5.6e-19 98.2 122 48.4
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 7.3e-19 97.8 129 48.1
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 9.6e-19 97.4 134 46.3
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 9.6e-19 97.4 132 46.2
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 1.6e-18 96.7 133 47.4
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 2.1e-18 96.3 119 48.7
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 2.1e-18 96.3 132 48.5
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 4.8e-18 95.1 123 48.0
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 6.2e-18 94.7 132 43.9
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 6.2e-18 94.7 119 48.7
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 8.1e-18 94.4 122 50.0
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 1.1e-17 94.0 124 48.4
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 1.1e-17 94.0 118 49.2
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 1.1e-17 94.0 128 47.7
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 1.1e-17 94.0 132 43.2
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 1.4e-17 93.6 115 53.0
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 2.4e-17 92.8 91 53.8
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 5.3e-17 91.7 130 46.9
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 5.3e-17 91.7 120 46.7
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 5.3e-17 91.7 103 58.3
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 3.4e-16 89.0 108 49.1
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 3.4e-16 89.0 113 47.8
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 4.5e-16 88.6 123 43.1
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 5.8e-16 88.2 123 43.9
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 9.9e-16 87.4 124 41.9
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 9.9e-16 87.4 120 45.0
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 2.2e-15 86.3 80 56.2
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 6.4e-15 84.7 120 42.5
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 6.4e-15 84.7 141 41.1
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 6.4e-15 84.7 141 41.1
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 1.1e-14 84.0 122 43.4
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 5.4e-14 81.6 109 45.9
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 7.1e-14 81.3 141 40.4
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 9.3e-14 80.9 138 42.0
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.2e-13 80.5 81 54.3
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 1.2e-13 80.5 86 50.0
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 1.6e-13 80.1 77 54.5
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 6.0e-13 78.2 121 42.1
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 5.1e-12 75.1 140 42.1
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 1.5e-11 73.6 111 41.4
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 1.5e-11 73.6 106 46.2
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 1.9e-11 73.2 72 52.8
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 4.3e-11 72.0 127 40.9
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 7.4e-11 71.2 122 41.8
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 9.6e-11 70.9 125 39.2
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 1.3e-10 70.5 122 41.0
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 1.3e-10 70.5 122 41.0
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 1.3e-10 70.5 122 41.0
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 1.3e-10 70.5 122 41.0
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 1.6e-10 70.1 86 44.2
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 3.7e-10 68.9 126 40.5
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 3.7e-10 68.9 122 41.0
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 6.2e-10 68.2 124 36.3
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 6.2e-10 68.2 110 43.6
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 6.2e-10 68.2 123 39.8
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 8.1e-10 67.8 124 36.3
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 1.8e-09 66.6 125 39.2
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 1.8e-09 66.6 124 35.5
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 9.0e-09 64.3 127 37.8
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 2.0e-08 63.2 98 40.8


User provided reference genes

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