Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 0.0e+00 1236.5 683 100.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.3e-240 835.9 660 69.7
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 6.9e-205 718.0 648 64.7
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.3e-203 713.8 647 62.9
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 8.4e-195 684.5 647 60.4
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 9.3e-194 681.0 643 61.4
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 3.5e-193 679.1 647 60.4
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 8.4e-187 657.9 546 66.3
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 3.0e-184 649.4 643 63.1
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 8.7e-184 647.9 534 65.2
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 7.4e-183 644.8 642 64.6
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 7.4e-183 644.8 646 59.3
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 7.4e-183 644.8 655 58.6
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 3.7e-182 642.5 590 62.0
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 3.1e-181 639.4 545 69.9
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.1e-181 639.4 569 66.6
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 5.3e-181 638.6 721 54.8
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 7.6e-180 634.8 573 63.4
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.0e-179 634.4 568 63.7
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.5e-178 629.8 675 56.7
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 4.2e-178 629.0 570 66.8
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.5e-178 628.6 569 61.0
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.6e-177 625.9 546 62.6
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.8e-176 623.6 579 65.6
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 6.7e-176 621.7 543 64.1
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 8.7e-176 621.3 657 57.2
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 7.4e-175 618.2 546 63.0
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 9.7e-175 617.8 570 63.5
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.2e-174 616.7 546 66.1
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 4.8e-174 615.5 576 66.3
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.1e-173 614.4 543 63.0
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 3.4e-172 609.4 544 61.9
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 1.3e-171 607.4 648 55.7
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 9.4e-170 601.3 641 55.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 2.1e-169 600.1 568 59.3
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.3e-168 596.7 638 56.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 3.0e-168 596.3 595 57.0
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.9e-168 595.9 646 55.7
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 5.1e-168 595.5 654 55.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 8.8e-168 594.7 643 55.7
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.1e-167 594.3 564 59.8
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.5e-167 594.0 647 55.2
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 2.6e-167 593.2 566 59.5
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 2.6e-167 593.2 601 55.7
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 3.3e-167 592.8 562 60.1
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 3.3e-167 592.8 648 54.9
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 5.7e-167 592.0 566 59.5
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.7e-166 590.5 526 61.2
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.8e-166 589.7 640 55.3
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 2.8e-166 589.7 648 55.2
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 2.8e-166 589.7 646 55.9
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.7e-166 589.3 562 60.1
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 6.3e-166 588.6 599 57.4
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.1e-165 587.8 593 56.8
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 2.4e-165 586.6 544 61.2
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.2e-164 584.3 561 58.8
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.2e-164 584.3 573 58.6
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.5e-164 583.9 543 59.9
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 5.9e-164 582.0 542 60.0
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 7.7e-164 581.6 560 58.9
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 2.9e-163 579.7 539 58.8
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 6.5e-163 578.6 543 59.5
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 8.5e-163 578.2 529 60.9
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.9e-162 577.0 604 55.8
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 5.5e-162 575.5 643 55.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 9.4e-162 574.7 540 58.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 9.4e-162 574.7 543 66.9
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 8.0e-161 571.6 586 55.6
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 6.7e-160 568.5 619 53.2
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.0e-159 567.0 540 58.7
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 5.7e-159 565.5 540 57.4
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.3e-158 564.3 629 53.4
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.5e-156 555.8 662 53.9
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 7.7e-156 555.1 647 54.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.9e-154 550.4 541 56.4
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.0e-152 544.7 550 57.5
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.8e-152 543.9 592 56.6
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 3.0e-152 543.1 569 56.1
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.5e-147 525.4 624 50.6
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.1e-141 508.1 618 49.2
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 9.1e-141 505.0 594 53.0
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 1.0e-139 501.5 471 66.5
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.1e-133 481.5 502 57.4
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 6.6e-131 472.2 413 63.4
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.5e-130 471.1 465 57.4
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.9e-122 444.1 432 60.4
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 2.2e-118 430.6 575 53.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 2.1e-116 424.1 547 44.4
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 3.5e-116 423.3 373 64.3
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 7.8e-116 422.2 406 58.9
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 6.6e-115 419.1 375 61.6
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.1e-113 414.1 405 59.0
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 8.9e-112 408.7 483 53.4
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 5.8e-95 352.8 409 51.8
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.4e-93 346.3 521 44.9
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 5.8e-87 326.2 312 56.1
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.9e-77 294.7 242 63.2
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.2e-68 265.4 578 35.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.5e-42 178.7 516 30.2
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 7.2e-37 159.8 140 57.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.1e-36 158.3 125 64.0
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 3.6e-36 157.5 125 64.0
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 4.0e-35 154.1 333 32.4
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.1e-32 146.0 164 51.2
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.7e-30 138.7 110 63.6
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 2.9e-30 137.9 94 72.3
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.9e-29 135.2 100 66.0
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.9e-22 111.3 122 53.3
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.4e-19 102.4 162 38.9
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 2.3e-19 101.7 87 60.9
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 3.4e-18 97.8 95 55.8
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.6e-15 89.0 53 79.2
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 3.2e-08 64.7 71 53.5


User provided reference genes

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