Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 2.0e-194 682.2 321 100.0
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.1e-157 560.1 320 78.4
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 7.3e-157 557.4 319 77.4
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 8.1e-156 553.9 318 78.9
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 2.0e-154 549.3 318 75.5
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 4.4e-154 548.1 318 76.4
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.3e-153 546.6 318 76.4
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.3e-153 546.6 318 76.4
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 1.7e-153 546.2 319 76.5
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 2.9e-153 545.4 318 76.1
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.7e-153 545.0 318 76.1
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 3.7e-153 545.0 319 77.4
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.4e-153 544.3 318 76.4
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.1e-152 543.5 322 77.0
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.4e-152 543.1 318 75.8
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.1e-152 541.6 318 76.1
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 7.1e-152 540.8 318 75.2
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 9.2e-152 540.4 318 75.5
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.2e-151 540.0 319 74.3
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.6e-151 539.7 318 75.8
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.7e-151 538.9 318 74.8
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.0e-150 537.0 318 75.5
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.3e-150 536.6 315 75.2
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.3e-150 536.6 318 75.8
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 2.3e-150 535.8 319 74.6
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 3.0e-150 535.4 321 73.8
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 1.9e-149 532.7 319 74.6
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 7.3e-149 530.8 320 75.3
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.2e-148 530.0 311 75.9
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.6e-148 529.6 318 73.6
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.6e-148 529.6 320 75.0
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 2.1e-148 529.3 318 74.2
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 2.1e-148 529.3 320 74.7
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 3.6e-148 528.5 309 73.5
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 3.6e-148 528.5 321 72.0
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 6.2e-148 527.7 318 73.9
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 6.2e-148 527.7 321 71.7
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.1e-147 526.9 319 75.2
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.8e-147 526.2 318 73.9
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.4e-147 525.8 318 73.9
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 3.1e-147 525.4 321 71.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.1e-147 525.4 320 72.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.2e-147 524.6 318 72.6
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.2e-147 524.6 318 74.8
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.2e-146 523.5 321 72.0
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.5e-146 523.1 318 74.5
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.6e-146 522.3 319 72.1
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 3.4e-146 521.9 309 73.1
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 4.4e-146 521.5 320 73.1
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 5.8e-146 521.2 321 70.7
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 5.8e-146 521.2 311 74.6
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 9.9e-146 520.4 315 73.3
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.3e-145 520.0 312 74.4
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.7e-145 519.6 311 75.2
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 1.7e-145 519.6 319 73.4
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.2e-145 519.2 311 75.2
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.8e-145 518.5 315 73.0
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 4.9e-145 518.1 314 73.6
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.9e-145 518.1 320 72.2
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 6.4e-145 517.7 312 75.0
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 6.4e-145 517.7 308 73.4
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 1.4e-144 516.5 307 74.6
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.9e-144 516.2 318 72.3
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.2e-144 515.0 318 72.6
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.4e-144 514.6 319 72.7
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 5.4e-144 514.6 321 72.0
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.1e-144 514.2 318 72.0
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 7.1e-144 514.2 318 72.0
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 7.1e-144 514.2 310 75.5
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.2e-143 513.5 319 72.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.2e-143 513.5 310 74.2
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 2.1e-143 512.7 313 73.2
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 2.7e-143 512.3 319 70.5
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 4.6e-143 511.5 318 72.0
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.7e-142 509.6 311 72.7
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.7e-142 509.6 308 73.1
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.7e-142 509.6 321 69.2
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.3e-142 509.2 318 72.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 3.0e-142 508.8 311 74.0
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.0e-142 508.8 318 72.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 3.9e-142 508.4 312 73.1
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 5.1e-142 508.1 318 71.7
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.9e-141 506.1 321 71.3
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.5e-141 505.8 321 72.6
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.3e-141 505.0 317 71.0
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 5.6e-141 504.6 308 70.5
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.2e-140 503.4 314 70.1
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.1e-140 502.7 319 70.2
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 4.7e-140 501.5 319 71.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.7e-140 501.5 316 70.3
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 6.2e-140 501.1 319 70.8
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.8e-139 499.6 308 71.4
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.8e-139 499.6 314 71.0
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.1e-139 498.8 317 69.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 6.9e-139 497.7 318 69.5
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 5.8e-138 494.6 321 69.2
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.6e-138 494.2 307 70.0
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 9.9e-138 493.8 307 68.4
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.3e-137 493.4 309 68.9
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.7e-137 493.0 318 67.0
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.4e-137 490.7 304 71.7
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.4e-136 490.0 309 68.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.9e-136 489.6 308 68.8
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 2.4e-136 489.2 318 70.1
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 2.4e-136 489.2 308 68.5
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.4e-136 489.2 305 70.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 2.4e-136 489.2 308 68.8
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.2e-135 486.9 308 68.2
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 2.1e-135 486.1 317 67.8
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.7e-135 485.7 306 69.9
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 7.8e-135 484.2 308 67.9
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.0e-134 482.3 297 71.4
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.1e-134 481.5 317 67.2
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 8.7e-134 480.7 317 67.5
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.1e-133 480.3 308 66.9
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.6e-133 477.2 318 67.0
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.3e-132 476.9 317 66.9
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.1e-131 473.8 318 64.2
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.1e-131 472.2 308 65.3
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.8e-130 468.0 288 72.9
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.4e-129 464.5 288 72.2
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.2e-128 462.2 275 73.1
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 4.2e-128 461.8 317 66.9
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 3.7e-124 448.7 283 71.0
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 8.1e-124 447.6 317 63.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.1e-123 447.2 322 61.8
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 1.8e-123 446.4 317 63.7
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.8e-123 446.4 313 62.6
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 7.9e-119 431.0 281 69.0
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 2.5e-117 426.0 320 59.1
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 9.6e-117 424.1 309 59.9
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.6e-116 423.3 315 63.2
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.8e-114 414.8 306 58.8
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.5e-109 400.2 320 54.7
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.6e-108 396.7 320 55.0
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.5e-106 390.2 317 59.6
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.5e-106 390.2 317 59.6
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.4e-104 383.6 303 59.7
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.6e-103 380.2 217 76.5
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.5e-101 373.6 225 71.1
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 8.5e-97 357.8 307 55.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.9e-90 335.1 312 49.7
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 7.0e-83 311.6 260 57.7
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.2e-73 280.0 307 46.6
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 5.5e-72 275.4 182 67.6
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.9e-62 241.5 258 46.5
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 9.8e-53 211.5 126 70.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.1e-51 208.0 134 70.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 3.3e-48 196.4 316 36.1
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.7e-42 176.8 113 68.1
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 1.1e-38 164.9 313 32.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.1e-32 144.8 235 36.6
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 8.1e-31 138.7 351 29.1
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.2e-28 130.6 96 57.3
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.2e-15 85.9 58 67.2
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.5e-13 81.3 74 58.1


User provided reference genes

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