Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22396 Nelumbo nucifera HOM05D004242 ORTHO05D004349 4.1e-159 565.5 496 100.0
TAR339G0002 Trochodendron aralioides HOM05D004242 ORTHO05D004349 1.8e-29 134.8 269 44.6
Ah.05g179200 Amaranthus hybridus HOM05D004242 ORTHO05D004349 1.1e-23 115.5 258 34.9
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 5.6e-23 113.2 256 40.6
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 4.8e-22 110.2 234 39.3
Sabra14G0075500 Salix brachista HOM05D004242 ORTHO05D004349 6.2e-22 109.8 256 37.1
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 1.8e-21 108.2 276 37.0
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 3.1e-21 107.5 196 40.3
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 1.2e-20 105.5 185 40.5
CiPaw.02G043200 Carya illinoinensis HOM05D004242 ORTHO05D004349 5.8e-20 103.2 247 39.3
VMungo0540G1056 Vigna mungo HOM05D004242 ORTHO05D004349 9.9e-20 102.4 267 33.7
Ciclev10019915m.g Citrus clementina HOM05D004242 ORTHO05D004349 6.4e-19 99.8 270 34.4
Cpa.g.sc144.11 Carica papaya HOM05D004242 ORTHO05D004349 8.4e-19 99.4 265 35.1
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 8.4e-19 99.4 224 35.7
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.1e-18 99.0 224 35.7
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 1.4e-18 98.6 262 38.5
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.9e-18 98.2 212 37.7
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 2.4e-18 97.8 242 35.1
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 2.4e-18 97.8 189 39.7
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 3.2e-18 97.4 212 37.7
FAN03G1939 Fragaria x ananassa HOM05D004242 ORTHO05D004349 4.2e-18 97.1 289 34.6
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 4.2e-18 97.1 222 34.2
FvH4_7g17260 Fragaria vesca HOM05D004242 ORTHO05D004349 7.1e-18 96.3 268 35.4
FAN06G4791 Fragaria x ananassa HOM05D004242 ORTHO05D004349 7.1e-18 96.3 268 35.4
FAN06G2582 Fragaria x ananassa HOM05D004242 ORTHO05D004349 9.3e-18 95.9 271 33.9
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 9.3e-18 95.9 194 36.1
DCAR_002987 Daucus carota HOM05D004242 ORTHO05D004349 1.6e-17 95.1 181 45.3
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 2.1e-17 94.7 199 36.2
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 3.5e-17 94.0 235 35.3
Thecc.01G336900 Theobroma cacao HOM05D004242 ORTHO05D004349 6.0e-17 93.2 265 34.0
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 7.9e-17 92.8 191 34.0
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 1.0e-16 92.4 244 37.3
FAN10G0542 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.3e-16 92.0 276 34.1
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 3.0e-16 90.9 247 33.2
Phvul.006G115800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 3.9e-16 90.5 254 32.3
SGA_v2.0_scaffold98G29435 Striga asiatica HOM05D004242 ORTHO05D004349 3.9e-16 90.5 207 36.2
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 5.1e-16 90.1 242 35.5
CiPaw.02G042800 Carya illinoinensis HOM05D004242 ORTHO05D004349 5.1e-16 90.1 241 33.6
FAN01G2496 Fragaria x ananassa HOM05D004242 ORTHO05D004349 5.1e-16 90.1 285 34.0
MSTRG.20915 Avicennia marina HOM05D004242 ORTHO05D004349 6.7e-16 89.7 237 38.0
Duzib133G0806 Durio zibethinus HOM05D004242 ORTHO05D004349 6.7e-16 89.7 218 34.9
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 6.7e-16 89.7 172 39.0
RcHm_v2.0_Chr3g0484701 Rosa chinensis HOM05D004242 ORTHO05D004349 8.7e-16 89.4 210 33.8
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.5e-15 88.6 258 37.2
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.5e-15 88.6 258 37.2
FAN10G1700 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.5e-15 88.6 276 34.4
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 1.5e-15 88.6 261 33.7
FAN17G2081 Fragaria x ananassa HOM05D004242 ORTHO05D004349 1.9e-15 88.2 287 35.9
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 2.5e-15 87.8 216 36.1
Manes.05G019100 Manihot esculenta HOM05D004242 ORTHO05D004349 2.5e-15 87.8 236 33.9
MSTRG.28279 Avicennia marina HOM05D004242 ORTHO05D004349 4.3e-15 87.0 232 34.9
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 5.6e-15 86.7 222 35.6
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 7.4e-15 86.3 246 29.7
Lj1g0015234 Lotus japonicus HOM05D004242 ORTHO05D004349 7.4e-15 86.3 249 32.5
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 9.6e-15 85.9 214 36.9
TPR.G4684 Trifolium pratense HOM05D004242 ORTHO05D004349 9.6e-15 85.9 159 39.0
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 1.6e-14 85.1 247 32.0
Lj9P602T20 Lonicera japonica HOM05D004242 ORTHO05D004349 2.1e-14 84.7 246 37.4
Lalb_Chr15g0076401 Lupinus albus HOM05D004242 ORTHO05D004349 2.8e-14 84.3 181 38.1
Medtr7g117980 Medicago truncatula HOM05D004242 ORTHO05D004349 2.8e-14 84.3 274 29.6
RcHm_v2.0_Chr1g0360631 Rosa chinensis HOM05D004242 ORTHO05D004349 4.8e-14 83.6 261 33.0
Solyc08g067370.1 Solanum lycopersicum HOM05D004242 ORTHO05D004349 4.8e-14 83.6 276 34.1
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 8.1e-14 82.8 267 34.1
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 8.1e-14 82.8 273 33.7
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 1.1e-13 82.4 242 36.0
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 1.8e-13 81.6 284 32.0
PSO761G0055 Papaver somniferum HOM05D004242 ORTHO05D004349 1.8e-13 81.6 222 35.6
Haze_15699 Corylus avellana HOM05D004242 ORTHO05D004349 2.4e-13 81.3 207 40.6
FAN22G2040 Fragaria x ananassa HOM05D004242 ORTHO05D004349 2.4e-13 81.3 279 34.1
FvH4_4g01200 Fragaria vesca HOM05D004242 ORTHO05D004349 3.1e-13 80.9 254 37.4
FAN12G0333 Fragaria x ananassa HOM05D004242 ORTHO05D004349 3.1e-13 80.9 254 37.4
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 3.1e-13 80.9 298 30.9
THA.LOC104817612 Tarenaya hassleriana HOM05D004242 ORTHO05D004349 6.9e-13 79.7 241 37.3
Gohir.A07G135500 Gossypium hirsutum HOM05D004242 ORTHO05D004349 9.0e-13 79.3 256 29.7
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 9.0e-13 79.3 256 29.7
Prupe.2G193900 Prunus persica HOM05D004242 ORTHO05D004349 1.2e-12 79.0 280 34.3
unitig_8.g4995 Utricularia gibba HOM05D004242 ORTHO05D004349 2.0e-12 78.2 245 34.7
Aqoxy2G02545 Aquilegia oxysepala HOM05D004242 ORTHO05D004349 2.6e-12 77.8 231 41.6
Lalb_Chr04g0261391 Lupinus albus HOM05D004242 ORTHO05D004349 2.6e-12 77.8 133 36.8
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 4.5e-12 77.0 252 31.7
Sc01g0002380 Simmondsia chinensis HOM05D004242 ORTHO05D004349 5.8e-12 76.6 112 40.2
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 7.6e-12 76.3 226 35.4
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 9.9e-12 75.9 283 30.4
Gorai.001G152400 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.7e-11 75.1 261 28.7
arahy.Tifrunner.gnm1.ann1.YBIH8U Arachis hypogaea HOM05D004242 ORTHO05D004349 2.2e-11 74.7 140 37.1
Cfa003761 Carpinus fangiana HOM05D004242 ORTHO05D004349 2.9e-11 74.3 209 36.8
Sed0022787 Sechium edule HOM05D004242 ORTHO05D004349 2.9e-11 74.3 247 30.4
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 3.8e-11 73.9 259 31.3
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 6.4e-11 73.2 249 34.5
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 8.4e-11 72.8 237 33.8
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 1.4e-10 72.0 141 34.8
Lalb_Chr10g0100731 Lupinus albus HOM05D004242 ORTHO05D004349 1.9e-10 71.6 219 33.3
BcaC02g12659 Brassica carinata HOM05D004242 ORTHO05D004349 2.4e-10 71.2 248 33.1
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 2.4e-10 71.2 182 37.9
Sp5g01480 Schrenkiella parvula HOM05D004242 ORTHO05D004349 2.4e-10 71.2 220 33.2
arahy.Tifrunner.gnm1.ann1.6W400J Arachis hypogaea HOM05D004242 ORTHO05D004349 5.5e-10 70.1 162 35.8
AT2G46630 Arabidopsis thaliana HOM05D004242 ORTHO05D004349 7.1e-10 69.7 156 39.7
Dinv32623 Davidia involucrata HOM05D004242 ORTHO05D004349 7.1e-10 69.7 115 38.3
GSVIVG01027399001 Vitis vinifera HOM05D004242 ORTHO05D004349 1.6e-09 68.6 228 31.1
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 2.1e-09 68.2 260 27.3
BraA05t19116Z Brassica rapa HOM05D004242 ORTHO05D004349 4.6e-09 67.0 246 32.9
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 4.6e-09 67.0 115 40.0
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 6.0e-09 66.6 179 33.0
CsaV3_3G007800 Cucumis sativus L. HOM05D004242 ORTHO05D004349 6.0e-09 66.6 236 28.8
ECA236G3302 Erigeron canadensis HOM05D004242 ORTHO05D004349 6.0e-09 66.6 204 38.2
Aa31LG1G28030 Aethionema arabicum HOM05D004242 ORTHO05D004349 7.9e-09 66.2 247 30.0
MELO3C005996.2 Cucumis melo HOM05D004242 ORTHO05D004349 1.0e-08 65.9 231 29.0
VMungo0331G0491 Vigna mungo HOM05D004242 ORTHO05D004349 1.3e-08 65.5 130 36.2
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 1.8e-08 65.1 230 25.7
Glyma.07G052632 Glycine max HOM05D004242 ORTHO05D004349 1.8e-08 65.1 185 31.9
CARHR141970 Cardamine hirsuta HOM05D004242 ORTHO05D004349 2.3e-08 64.7 161 40.4
Thhalv10006210m.g Eutrema salsugineum HOM05D004242 ORTHO05D004349 2.3e-08 64.7 221 34.8
Glyma.16G021500 Glycine max HOM05D004242 ORTHO05D004349 2.3e-08 64.7 175 29.1
MELO3C022249.2 Cucumis melo HOM05D004242 ORTHO05D004349 3.0e-08 64.3 160 37.5
Nitab4.5_0000307g0130 Nicotiana tabacum HOM05D019980 ORTHO05D022204 3.0e-08 64.3 256 30.1
ClCG06G002780 Citrullus lanatus HOM05D004242 ORTHO05D004349 3.9e-08 63.9 268 31.0
Sed0006480 Sechium edule HOM05D004242 ORTHO05D004349 3.9e-08 63.9 235 33.6
Atru.chr5.733 Acer truncatum HOM05D004242 ORTHO05D004349 5.1e-08 63.5 283 31.4
BcaC02g07046 Brassica carinata HOM05D004242 ORTHO05D004349 5.1e-08 63.5 141 41.8
Medtr8g027290 Medicago truncatula HOM05D004242 ORTHO05D004349 5.1e-08 63.5 186 33.3
GSVIVG01027401001 Vitis vinifera HOM05D004242 ORTHO05D004349 1.1e-07 62.4 213 29.1
Carub.0004s2934 Capsella rubella HOM05D004242 ORTHO05D004349 1.5e-07 62.0 141 42.6
CiPaw.02G043000 Carya illinoinensis HOM05D004242 ORTHO05D004349 1.5e-07 62.0 114 36.8
BolC4t21785H Brassica oleracea HOM05D004242 ORTHO05D004349 1.9e-07 61.6 247 33.6
BcaC07g42602 Brassica carinata HOM05D004242 ORTHO05D004349 2.5e-07 61.2 148 34.5
A05p01160 Brassica napus HOM05D004242 ORTHO05D004349 2.5e-07 61.2 246 32.1
BcaC02g12660 Brassica carinata HOM05D004242 ORTHO05D004349 4.3e-07 60.5 247 33.6
C04p01320 Brassica napus HOM05D004242 ORTHO05D004349 4.3e-07 60.5 247 33.6
Dinv18906 Davidia involucrata HOM05D004242 ORTHO05D004349 4.3e-07 60.5 157 33.8
Phvul.010G116800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 7.4e-07 59.7 229 27.9
Lj3g0014324 Lotus japonicus HOM05D004242 ORTHO05D004349 9.6e-07 59.3 229 27.9
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 9.6e-07 59.3 122 32.0
VMungo0331G0961 Vigna mungo HOM05D004242 ORTHO05D004349 9.6e-07 59.3 128 33.6
C08p36720 Brassica napus HOM05D004242 ORTHO05D004349 1.3e-06 58.9 192 30.2
BolC8t51254H Brassica oleracea HOM05D004242 ORTHO05D004349 1.3e-06 58.9 192 30.2
VMungo0331G0257 Vigna mungo HOM05D004242 ORTHO05D004349 1.3e-06 58.9 237 27.8
CsaV3_6G008950 Cucumis sativus L. HOM05D004242 ORTHO05D004349 1.6e-06 58.5 239 28.5
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.6e-06 58.5 112 32.1
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 2.1e-06 58.2 114 31.6
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 2.8e-06 57.8 209 28.2
AL4G46060 Arabidopsis lyrata HOM05D004242 ORTHO05D004349 2.8e-06 57.8 209 27.3
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 2.8e-06 57.8 170 32.4
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 3.7e-06 57.4 118 32.2
Lj9C255T10 Lonicera japonica HOM05D012621 ORTHO05D004349 3.7e-06 57.4 128 32.0
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 3.7e-06 57.4 171 29.2
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 4.8e-06 57.0 160 27.5
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 6.2e-06 56.6 143 30.1
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 6.2e-06 56.6 115 31.3
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 6.2e-06 56.6 127 28.3
Lj8A559T40 Lonicera japonica HOM05D012621 ORTHO05D004349 6.2e-06 56.6 130 31.5
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 6.2e-06 56.6 118 36.4
Nitab4.5_0002527g0010 Nicotiana tabacum HOM05D019980 ORTHO05D022204 6.2e-06 56.6 254 27.2


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