Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.4e-296 1022.3 557 100.0
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 5.6e-229 797.7 560 77.9
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 3.7e-225 785.0 564 77.0
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 2.4e-224 782.3 537 79.5
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 3.2e-224 781.9 542 75.3
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 1.6e-223 779.6 534 75.8
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 2.0e-223 779.2 555 79.5
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 2.0e-223 779.2 555 76.4
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 3.5e-223 778.5 562 75.6
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 1.7e-222 776.2 556 77.9
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 3.9e-222 775.0 564 75.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 8.6e-222 773.9 545 80.0
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 5.6e-221 771.2 533 76.4
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 9.5e-221 770.4 477 81.3
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 6.2e-220 767.7 541 76.3
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.1e-219 766.9 434 86.4
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 2.3e-219 765.8 539 76.4
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 6.8e-219 764.2 563 78.2
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.5e-218 763.1 428 87.1
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.6e-218 762.3 532 76.5
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 1.3e-217 760.0 546 73.1
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.9e-216 756.1 561 75.2
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 5.4e-216 754.6 458 81.0
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 7.1e-216 754.2 450 82.7
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 4.6e-215 751.5 537 76.9
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 7.8e-215 750.7 507 76.7
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 6.6e-214 747.7 556 76.8
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 1.1e-213 746.9 558 76.2
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 1.1e-213 746.9 559 76.0
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.5e-213 746.5 532 72.4
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 1.9e-213 746.1 537 76.2
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 2.5e-213 745.7 498 76.1
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 3.3e-213 745.3 505 75.4
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 4.3e-213 745.0 552 75.2
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.2e-212 743.4 443 81.7
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 3.6e-212 741.9 566 73.3
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 8.1e-212 740.7 566 70.5
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 2.6e-210 735.7 538 74.5
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 7.6e-210 734.2 534 75.3
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 2.9e-209 732.3 531 76.1
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 4.9e-209 731.5 545 73.0
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 4.9e-209 731.5 548 76.5
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 1.1e-208 730.3 517 72.3
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 1.4e-208 729.9 523 77.1
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 7.1e-208 727.6 524 73.1
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 1.6e-207 726.5 538 71.9
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 1.6e-207 726.5 539 74.8
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 4.6e-207 724.9 531 75.7
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.6e-207 724.9 531 76.3
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 6.0e-207 724.5 451 79.4
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 6.0e-207 724.5 494 76.1
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 3.9e-206 721.8 501 74.9
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 6.6e-206 721.1 458 77.9
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 8.6e-206 720.7 531 75.1
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 5.6e-205 718.0 447 79.4
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 7.3e-205 717.6 523 73.2
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.6e-204 716.5 523 72.7
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 2.8e-204 715.7 542 73.6
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 1.8e-203 713.0 533 76.4
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 6.8e-203 711.1 442 79.4
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.2e-202 710.3 431 81.9
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 1.5e-202 709.9 542 69.6
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 1.5e-202 709.9 562 70.5
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 7.6e-202 707.6 493 73.6
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 7.6e-202 707.6 534 73.0
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.3e-201 706.8 566 66.1
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 2.9e-201 705.7 474 75.7
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 3.8e-201 705.3 436 79.6
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 1.1e-200 703.7 473 74.8
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 2.4e-200 702.6 532 70.5
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 2.7e-199 699.1 566 71.6
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 3.5e-199 698.7 422 82.7
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 1.3e-198 696.8 435 80.2
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 5.1e-198 694.9 535 68.6
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.4e-195 686.8 480 73.8
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.3e-193 680.2 467 74.5
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 8.4e-193 677.6 424 77.1
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 4.2e-192 675.2 421 77.2
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 4.2e-192 675.2 421 77.2
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 5.4e-192 674.9 533 71.7
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 7.1e-192 674.5 436 75.5
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 9.3e-192 674.1 425 76.9
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 9.3e-192 674.1 421 77.2
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 9.3e-192 674.1 546 68.9
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.3e-190 670.2 533 69.8
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.7e-190 669.8 425 76.2
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.0e-190 669.1 436 75.2
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 3.9e-190 668.7 424 75.9
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.5e-189 666.8 421 78.4
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 4.3e-189 665.2 424 76.7
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 2.1e-188 662.9 427 75.6
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 3.6e-188 662.1 459 73.6
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 2.4e-187 659.4 424 75.7
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.5e-186 656.8 558 70.8
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.2e-184 649.0 533 71.5
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.0e-182 644.0 533 70.7
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 3.0e-182 642.5 532 66.7
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 4.2e-176 622.1 443 69.1
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 5.5e-176 621.7 540 68.1
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 7.1e-176 621.3 536 66.6
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 3.0e-174 615.9 519 64.4
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 3.3e-173 612.5 510 64.1
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 5.7e-173 611.7 454 76.2
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 9.6e-173 610.9 378 83.3
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.3e-172 610.5 354 84.5
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 2.1e-172 609.8 551 66.2
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.1e-171 607.4 396 77.5
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 1.8e-171 606.7 497 63.6
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 3.1e-171 605.9 499 64.3
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 3.4e-170 602.4 480 65.8
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 1.7e-169 600.1 491 63.7
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 6.5e-169 598.2 519 62.6
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 1.1e-168 597.4 519 62.4
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 2.5e-168 596.3 428 72.4
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 2.0e-162 576.6 431 71.9
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 9.7e-157 557.8 478 60.7
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 6.3e-156 555.1 370 74.1
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 2.0e-154 550.1 489 60.7
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.7e-153 547.0 489 59.9
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 1.0e-150 537.7 431 63.1
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 1.7e-148 530.4 526 62.5
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.7e-140 503.8 504 55.4
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 4.7e-135 485.7 501 57.3
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 6.1e-135 485.3 376 66.8
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 8.0e-135 485.0 526 53.0
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 9.8e-133 478.0 501 57.5
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 9.8e-133 478.0 383 62.4
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 1.4e-131 474.2 396 58.8
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 7.7e-130 468.4 451 55.7
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 5.0e-129 465.7 392 61.7
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 2.5e-128 463.4 481 52.4
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 8.8e-126 454.9 724 43.8
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 1.2e-125 454.5 502 53.6
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 2.2e-124 450.3 430 58.6
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 5.4e-123 445.7 514 51.8
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 6.6e-121 438.7 415 58.3
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 4.3e-112 409.5 408 52.5
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 1.3e-108 397.9 351 58.7
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 3.5e-106 389.8 469 50.5
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.1e-103 380.6 262 71.4
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 2.2e-100 370.5 470 47.9
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 3.2e-99 366.7 282 67.7
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 4.1e-99 366.3 506 45.3
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 7.8e-98 362.1 247 76.5
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 4.7e-95 352.8 304 59.9
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 5.1e-89 332.8 435 45.7
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 3.8e-84 316.6 414 41.8
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 2.7e-82 310.5 271 63.8
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 2.0e-77 294.3 273 67.0
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.4e-75 288.1 332 47.3
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 2.4e-75 287.3 167 83.8
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 2.8e-71 273.9 356 48.3
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.2e-53 215.3 302 46.7
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 9.7e-40 169.1 116 67.2
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 2.0e-32 144.8 100 69.0
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 4.1e-30 137.1 263 37.3
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 1.7e-28 131.7 119 62.2
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.7e-26 124.4 93 74.2
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 2.7e-26 124.4 106 61.3
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 3.0e-25 120.9 223 42.6
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 4.8e-23 113.6 121 55.4
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.7e-21 107.8 71 73.2
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 8.5e-20 102.8 155 43.9
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 1.5e-19 102.1 123 45.5
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 1.5e-19 102.1 148 41.2
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 9.4e-19 99.4 121 48.8
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 2.1e-18 98.2 83 60.2
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 8.0e-18 96.3 45 95.6
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 1.5e-16 92.0 242 28.5
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 9.8e-16 89.4 75 54.7
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 1.4e-14 85.5 46 87.0
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 7.0e-14 83.2 145 35.9
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 7.2e-11 73.2 127 39.4
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 3.6e-10 70.9 112 37.5
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 8.8e-09 66.2 199 25.6
CiPaw.05G188800 Carya illinoinensis HOM05D003858 ORTHO05D127864 5.7e-08 63.5 36 86.1
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 5.7e-08 63.5 210 25.2
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.7e-07 62.0 73 38.4
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 2.2e-07 61.6 43 60.5
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.4e-06 58.9 199 24.6


User provided reference genes

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