Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 6.4e-210 733.8 361 100.0
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 3.3e-121 439.1 301 72.8
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 5.6e-121 438.3 301 71.8
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 7.3e-121 438.0 341 66.6
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 9.5e-121 437.6 268 78.7
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 1.2e-120 437.2 265 79.6
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 5.2e-119 431.8 308 70.5
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 6.8e-119 431.4 269 76.6
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 2.0e-118 429.9 295 72.9
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 3.4e-118 429.1 320 69.7
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 4.4e-118 428.7 283 73.9
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 7.5e-118 427.9 268 76.9
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 6.4e-117 424.9 272 73.9
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 8.3e-117 424.5 260 76.9
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 8.3e-117 424.5 268 76.1
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 1.1e-116 424.1 327 64.2
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 1.8e-116 423.3 268 76.1
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 3.2e-116 422.5 328 67.4
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 9.2e-116 421.0 267 74.9
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 4.6e-115 418.7 278 73.7
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 5.9e-115 418.3 278 73.7
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 1.0e-114 417.5 302 68.2
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 8.6e-114 414.5 249 76.7
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 3.3e-113 412.5 299 68.6
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 3.3e-113 412.5 302 67.2
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 7.3e-113 411.4 323 66.9
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 9.5e-113 411.0 322 64.9
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 1.6e-112 410.2 306 68.6
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.1e-112 409.8 307 67.8
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 2.8e-112 409.5 259 74.9
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 4.7e-112 408.7 257 75.5
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.4e-111 407.1 284 71.8
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 1.8e-111 406.8 303 67.7
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 2.3e-111 406.4 308 67.2
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 4.0e-111 405.6 258 72.5
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 4.0e-111 405.6 300 69.7
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 8.9e-111 404.4 259 75.7
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 3.4e-110 402.5 291 66.7
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 9.8e-110 401.0 260 71.5
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 1.3e-109 400.6 257 75.5
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 1.7e-109 400.2 251 73.7
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 1.7e-109 400.2 292 68.2
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 2.9e-109 399.4 269 73.2
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 4.9e-109 398.7 260 71.5
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 4.9e-109 398.7 277 70.0
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 6.4e-109 398.3 309 66.3
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 8.3e-109 397.9 298 66.1
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 1.1e-108 397.5 260 71.5
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 1.1e-108 397.5 298 66.4
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 1.9e-108 396.7 260 71.2
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 1.9e-108 396.7 260 71.2
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 1.9e-108 396.7 260 71.2
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 1.9e-108 396.7 268 73.5
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 1.9e-108 396.7 270 73.0
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 7.0e-108 394.8 277 69.7
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 9.2e-108 394.4 261 74.3
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 1.2e-107 394.0 294 67.0
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 2.0e-107 393.3 262 73.3
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 2.7e-107 392.9 248 73.0
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 1.0e-106 391.0 255 73.3
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 1.9e-105 386.7 259 69.5
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 3.3e-105 386.0 349 59.9
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 5.6e-105 385.2 269 69.1
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 9.5e-105 384.4 253 70.4
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 2.1e-104 383.3 310 63.9
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 4.7e-104 382.1 262 69.1
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 8.9e-103 377.9 324 60.2
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 1.2e-102 377.5 288 64.9
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 1.5e-102 377.1 278 69.1
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 2.0e-102 376.7 323 61.9
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 2.7e-99 366.3 250 68.8
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 3.5e-99 365.9 266 69.5
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 3.0e-98 362.8 277 64.3
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 3.0e-98 362.8 295 59.7
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.5e-97 360.5 296 61.1
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 1.9e-97 360.1 267 66.3
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 1.9e-97 360.1 248 68.1
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 1.9e-97 360.1 247 71.3
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 3.3e-97 359.4 231 73.2
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 3.3e-97 359.4 238 72.7
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 6.2e-96 355.1 259 66.0
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 1.1e-95 354.4 285 61.4
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 1.8e-95 353.6 259 64.9
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 5.4e-92 342.0 274 60.6
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 2.7e-91 339.7 324 54.9
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 2.3e-90 336.7 208 80.3
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 1.2e-88 330.9 268 63.8
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.4e-87 327.4 225 74.7
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 7.6e-86 321.6 199 76.4
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 1.6e-83 313.9 277 60.3
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 7.8e-83 311.6 272 58.8
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 1.4e-79 300.8 257 56.4
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 3.4e-78 296.2 199 73.4
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 2.9e-77 293.1 183 74.9
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 1.3e-74 284.3 170 76.5
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 3.9e-74 282.7 216 68.1
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 7.4e-73 278.5 168 78.0
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 1.2e-70 271.2 217 62.2
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 2.4e-68 263.5 169 71.0
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.9e-66 256.1 310 49.0
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.1e-63 246.5 230 57.4
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 4.3e-57 226.1 154 73.4
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 1.3e-50 204.5 247 46.2
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 1.5e-49 201.1 127 74.0
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 5.7e-49 199.1 137 65.7
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 6.7e-42 175.6 227 40.5
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 2.9e-37 160.2 156 53.2
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 1.8e-31 141.0 90 78.9
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 5.0e-29 132.9 104 60.6
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 9.4e-28 128.6 122 55.7
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.7e-27 127.1 75 78.7
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 1.5e-25 121.3 154 44.8
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 5.3e-23 112.8 73 68.5
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.7e-21 107.8 104 59.6
EL10Ac8g19274 Beta vulgaris HOM05D006526 ORTHO05D008496 3.7e-16 90.1 68 66.2
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 4.8e-16 89.7 66 66.7
BraA06t24956Z Brassica rapa HOM05D006526 ORTHO05D024464 1.4e-15 88.2 102 46.1
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 7.0e-15 85.9 60 68.3
CSS0047032 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 6.5e-13 79.3 57 64.9
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 1.9e-12 77.8 55 65.5
CSS0022358 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.9e-12 77.8 54 66.7
C08p24000 Brassica napus HOM05D006526 ORTHO05D024464 1.2e-11 75.1 76 50.0
BolC8t50022H Brassica oleracea HOM05D006526 ORTHO05D024464 4.0e-10 70.1 55 60.0
A06p18730 Brassica napus HOM05D006526 ORTHO05D024464 1.2e-09 68.6 83 44.6
BcaC07g39377 Brassica carinata HOM05D006526 ORTHO05D024464 5.7e-09 66.2 46 65.2
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 8.3e-08 62.4 283 26.5
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 1.1e-07 62.0 227 27.8
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 3.1e-07 60.5 292 25.3
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 4.1e-07 60.1 226 29.2
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 5.4e-07 59.7 204 27.5
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 7.0e-07 59.3 212 26.4
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 1.2e-06 58.5 209 26.8
Cre05.g234657 Chlamydomonas reinhardtii HOM05D004609 ORTHO05D005537 1.2e-06 58.5 194 30.9
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 1.2e-06 58.5 289 24.2
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 2.0e-06 57.8 142 32.4
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-06 57.8 222 26.6
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.7e-06 57.4 274 26.3
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 2.7e-06 57.4 220 27.7
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 3.5e-06 57.0 228 26.8
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 3.5e-06 57.0 215 26.0
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 3.5e-06 57.0 210 24.8
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 3.5e-06 57.0 211 25.6
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 4.5e-06 56.6 204 26.0
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 4.5e-06 56.6 226 26.1
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 4.5e-06 56.6 217 25.8
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 4.5e-06 56.6 207 25.6
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 4.5e-06 56.6 210 26.7
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 4.5e-06 56.6 238 25.6
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 4.5e-06 56.6 216 25.9
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 5.9e-06 56.2 214 25.2
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 5.9e-06 56.2 274 26.3
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 5.9e-06 56.2 225 25.3
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 7.8e-06 55.8 217 26.7
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 7.8e-06 55.8 225 27.1
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 7.8e-06 55.8 228 26.8
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 7.8e-06 55.8 210 27.1
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 7.8e-06 55.8 210 26.2


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