Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.1e-278 962.6 478 100.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.6e-240 834.3 478 84.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 9.0e-228 793.5 472 80.9
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 4.2e-225 784.6 478 79.5
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.8e-223 779.2 476 78.6
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.5e-222 776.2 474 78.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 8.2e-221 770.4 478 77.0
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 9.0e-220 766.9 477 77.4
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.0e-218 763.5 470 77.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 1.3e-218 763.1 471 77.5
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 8.4e-218 760.4 478 76.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 5.5e-217 757.7 502 75.1
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 7.1e-217 757.3 473 75.3
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.6e-216 756.1 471 76.9
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.1e-216 755.7 475 77.1
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 3.5e-216 755.0 474 76.6
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.5e-216 755.0 472 76.1
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 4.6e-216 754.6 478 76.2
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 6.1e-216 754.2 472 76.1
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 3.0e-215 751.9 472 75.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 5.1e-215 751.1 479 74.7
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 6.7e-215 750.7 474 75.1
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.5e-214 748.8 472 76.3
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 4.3e-214 748.0 501 73.7
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 7.4e-214 747.3 477 74.2
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 7.4e-214 747.3 472 75.6
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 9.7e-214 746.9 479 74.7
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 9.7e-214 746.9 471 74.9
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 9.7e-214 746.9 471 74.9
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 2.8e-213 745.3 477 75.1
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 3.7e-213 745.0 477 74.8
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.1e-212 743.4 478 73.4
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.8e-212 742.7 472 75.4
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.4e-212 742.3 472 75.2
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.5e-211 739.6 513 70.6
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 4.5e-211 738.0 475 74.5
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.0e-210 736.9 477 73.4
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.7e-210 736.1 478 74.7
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 2.9e-210 735.3 479 73.5
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.8e-210 734.9 477 73.6
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 6.5e-210 734.2 469 74.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 9.4e-209 730.3 478 73.0
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.6e-208 729.6 469 74.4
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.1e-208 729.2 507 70.4
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.7e-206 721.1 510 70.0
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.7e-205 719.5 507 70.0
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 3.7e-205 718.4 469 72.7
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.4e-204 716.5 477 71.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 4.5e-203 711.4 564 64.7
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.0e-202 710.3 475 72.0
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 2.5e-201 705.7 511 66.9
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.8e-197 692.2 470 70.0
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.7e-194 682.9 545 62.8
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.7e-194 682.9 500 64.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.5e-193 679.1 474 69.2
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.0e-191 672.2 476 70.2
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 5.9e-187 657.9 469 66.5
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.3e-186 656.8 393 80.7
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.8e-186 655.2 466 67.0
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 1.9e-185 652.9 467 64.5
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 3.2e-185 652.1 407 74.7
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.0e-182 642.9 410 75.1
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.0e-182 642.9 410 75.1
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 7.5e-182 641.0 474 65.2
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.2e-181 639.4 475 64.6
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 5.4e-180 634.8 412 72.3
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.6e-179 633.3 471 65.6
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.5e-178 627.5 389 76.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.5e-177 625.9 471 65.0
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 8.0e-176 620.9 383 77.5
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.7e-173 612.1 429 69.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 3.7e-173 612.1 476 64.5
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 2.0e-171 606.3 544 59.2
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.0e-171 606.3 474 62.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.5e-169 600.1 365 78.9
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 2.3e-159 566.2 476 60.3
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 2.9e-157 559.3 335 78.8
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.4e-156 555.1 368 73.6
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 6.4e-149 531.6 333 75.4
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 7.3e-145 518.1 386 68.1
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.7e-117 427.2 280 71.4
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 6.7e-98 362.1 237 71.3
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 2.0e-70 270.8 183 71.6
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.7e-67 260.4 455 31.6
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 9.1e-63 245.4 146 80.1
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.4e-55 220.7 235 54.5
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-50 204.1 159 66.7
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.6e-44 183.0 127 66.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.4e-26 125.2 407 25.8
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 4.0e-26 123.6 77 72.7
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.5e-20 104.4 402 24.9
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 2.9e-16 90.9 347 25.4
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.6e-14 85.1 57 71.9
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 2.1e-14 84.7 474 23.4
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 1.4e-07 62.0 50 58.0
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 2.1e-06 58.2 370 22.2


User provided reference genes

Program Settings