Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22175 Nelumbo nucifera HOM05D049825 ORTHO05D000002 1.5e-55 219.2 102 100.0
Manes.02G187850 Manihot esculenta HOM05D000004 ORTHO05D000002 1.7e-11 72.8 99 38.4
Manes.10G110180 Manihot esculenta HOM05D000004 ORTHO05D000002 5.0e-11 71.2 97 36.1
Ca_11979_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.3e-10 68.2 69 46.4
Manes.13G089210 Manihot esculenta HOM05D000004 ORTHO05D000002 7.3e-10 67.4 100 35.0
Psat4g090320 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-09 65.9 102 36.3
Psat5g149360 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-09 64.3 67 43.3
Psat5g245360 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-09 64.3 72 41.7
Cpa.g.sc37.103 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-08 63.5 96 34.4
Psat0s69g0040 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-08 63.2 82 37.8
Manes.10G090351 Manihot esculenta HOM05D000004 ORTHO05D000002 2.3e-08 62.4 74 40.5
ECA246G1748 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-08 62.0 77 40.3
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-08 61.6 109 38.5
Psat6g169200 Pisum sativum HOM05D003122 ORTHO05D000002 4.0e-08 61.6 74 41.9
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 5.2e-08 61.2 73 32.9
Ca_19898_v3 Cicer arietinum L. HOM05D003075 ORTHO05D003430 6.8e-08 60.8 76 39.5
SHI54825 Sapria himalayana HOM05D000004 ORTHO05D000002 8.9e-08 60.5 72 38.9
ECA234G4565 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 71 45.1
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 70 50.0
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-07 60.1 90 37.8
SHI52889 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-07 60.1 72 38.9
ECA247G2318 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 59.7 94 35.1
Manes.04G037351 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-07 59.7 74 37.8
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 2.0e-07 59.3 72 41.7
Cpa.g.sc2.141 Carica papaya HOM05D000004 ORTHO05D000002 2.0e-07 59.3 87 34.5
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-07 59.3 76 38.2
Manes.04G056666 Manihot esculenta HOM05D000004 ORTHO05D000002 2.0e-07 59.3 81 35.8
PSO063G4960 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-07 59.3 65 44.6
Psat2g059880 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-07 59.3 76 40.8
Psat5g135120 Pisum sativum HOM05D000004 ORTHO05D011729 2.0e-07 59.3 74 40.5
CSS0026486 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.6e-07 58.9 72 40.3
Cpa.g.sc23.138 Carica papaya HOM05D000004 ORTHO05D000002 2.6e-07 58.9 74 39.2
ECA233G4342 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-07 58.9 62 45.2
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-07 58.9 71 43.7
CSS0027869 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-07 58.5 72 38.9
COL.COLO4_10142 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.4e-07 58.5 64 39.1
Ca_27085_v3 Cicer arietinum L. HOM05D000290 ORTHO05D006513 4.4e-07 58.2 76 40.8
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-07 57.8 96 39.6
Psat0s2641g0160 Pisum sativum HOM05D000004 ORTHO05D000002 5.8e-07 57.8 74 40.5
SHI02922 Sapria himalayana HOM05D000004 ORTHO05D000002 5.8e-07 57.8 72 40.3
CANSAT80G2866 Cannabis sativa HOM05D000004 ORTHO05D000002 7.5e-07 57.4 98 31.6
Manes.14G153850 Manihot esculenta HOM05D000004 ORTHO05D000002 7.5e-07 57.4 60 53.3
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 7.5e-07 57.4 76 38.2
SHI18910 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-07 57.0 72 43.1
Manes.04G053766 Manihot esculenta HOM05D000004 ORTHO05D000002 1.3e-06 56.6 74 37.8
PSO063G5209 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 56.6 65 44.6
SHI27453 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-06 56.6 68 36.8
TPR.G39604 Trifolium pratense HOM05D000004 ORTHO05D000002 1.3e-06 56.6 74 33.8
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 75 41.3
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 75 41.3
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 75 41.3
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-06 56.6 75 41.3
ECA233G0465 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-06 56.2 54 50.0
PSO210G5334 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-06 56.2 65 41.5
Atru.chr10.1143 Acer truncatum HOM05D000004 ORTHO05D000002 2.2e-06 55.8 72 44.4
ECA234G4858 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.2e-06 55.8 45 53.3
Manes.15G069950 Manihot esculenta HOM05D000004 ORTHO05D000002 2.2e-06 55.8 72 34.7
SHI02826 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 55.8 74 35.1
SHI42057 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 55.8 71 42.3
PSO170G6792 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-06 55.5 65 41.5
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 2.9e-06 55.5 70 40.0
ClCG05G011900 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.7e-06 55.1 68 44.1
TPR.G7389 Trifolium pratense HOM05D011284 ORTHO05D018089 3.7e-06 55.1 76 39.5
TPR.G9693 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-06 55.1 75 40.0
CSS0001157 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.7 71 40.8
CSS0043575 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.7 66 40.9
Cpa.g.sc56.17 Carica papaya HOM05D000004 ORTHO05D000002 4.9e-06 54.7 88 34.1
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.9e-06 54.7 111 37.8
PSO782G0231 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-06 54.7 76 38.2
RcHm_v2.0_Chr5g0082941 Rosa chinensis HOM05D000004 ORTHO05D000002 4.9e-06 54.7 60 43.3
SHI34766 Sapria himalayana HOM05D000004 ORTHO05D000002 4.9e-06 54.7 72 37.5
Sopen05g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-06 54.7 67 41.8
SGA_v2.0_scaffold165G38257 Striga asiatica HOM05D000004 ORTHO05D000002 4.9e-06 54.7 76 39.5
PSO801G0138 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-06 54.3 65 38.5
SHI10882 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 54.3 76 35.5
CSS0035406 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-06 53.9 66 40.9
CSS0050218 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-06 53.9 72 38.9
CANSAT01G0003 Cannabis sativa HOM05D000004 ORTHO05D000002 8.3e-06 53.9 68 39.7
Manes.07G000550 Manihot esculenta HOM05D000004 ORTHO05D000002 8.3e-06 53.9 62 40.3
Nn1g06419 Nelumbo nucifera HOM05D049825 ORTHO05D000002 8.3e-06 53.9 27 96.3
Psat7g011880 Pisum sativum HOM05D000004 ORTHO05D000002 8.3e-06 53.9 94 30.9
VMungo1309G1131 Vigna mungo HOM05D000004 ORTHO05D000002 8.3e-06 53.9 70 42.9


User provided reference genes

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