Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 4.8e-91 337.8 171 100.0
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 2.2e-67 259.2 168 80.4
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.5e-63 245.7 168 75.0
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 7.3e-63 244.2 169 74.6
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 3.6e-62 241.9 166 72.3
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 2.3e-61 239.2 168 70.2
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 5.2e-61 238.0 156 76.9
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 6.8e-61 237.7 168 73.8
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.6e-60 235.7 164 76.2
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 7.5e-60 234.2 171 73.7
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.2e-59 232.6 169 74.0
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 2.9e-59 232.3 170 69.4
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 2.9e-59 232.3 171 71.9
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.4e-58 229.9 159 73.6
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 1.9e-58 229.6 165 69.7
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 2.4e-58 229.2 168 68.5
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 1.2e-57 226.9 159 73.0
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 1.2e-57 226.9 174 67.2
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.6e-57 226.5 171 70.8
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.7e-57 225.7 168 69.6
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 2.7e-57 225.7 156 72.4
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 2.7e-57 225.7 168 66.7
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 4.6e-57 224.9 168 67.3
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 4.6e-57 224.9 158 71.5
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 4.6e-57 224.9 158 71.5
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 6.0e-57 224.6 167 73.1
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 6.0e-57 224.6 168 67.3
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 7.8e-57 224.2 158 71.5
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 7.8e-57 224.2 157 72.6
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 7.8e-57 224.2 174 66.7
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.0e-56 223.8 156 69.9
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 1.3e-56 223.4 160 70.0
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 3.9e-56 221.9 172 65.1
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 5.1e-56 221.5 160 71.9
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 6.6e-56 221.1 154 73.4
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 8.6e-56 220.7 158 71.5
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 8.6e-56 220.7 158 72.2
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 8.6e-56 220.7 168 66.7
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.1e-55 220.3 167 71.9
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.1e-55 220.3 153 71.2
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.1e-55 220.3 153 71.2
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.1e-55 220.3 158 70.3
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.5e-55 219.9 154 71.4
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.5e-55 219.2 158 71.5
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.5e-55 219.2 168 66.1
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 2.5e-55 219.2 158 70.3
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 4.3e-55 218.4 168 65.5
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 5.6e-55 218.0 168 65.5
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 7.3e-55 217.6 153 70.6
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.2e-54 216.9 155 67.7
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 1.2e-54 216.9 168 65.5
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 2.8e-54 215.7 159 71.7
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 3.6e-54 215.3 156 67.9
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 3.6e-54 215.3 156 67.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 6.2e-54 214.5 160 65.6
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 1.4e-53 213.4 160 65.0
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.8e-53 213.0 156 65.4
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 2.3e-53 212.6 154 70.8
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 2.3e-53 212.6 154 70.8
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 3.1e-53 212.2 156 66.7
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.0e-53 211.8 154 70.8
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 4.0e-53 211.8 158 69.6
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 4.0e-53 211.8 156 66.0
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 4.0e-53 211.8 155 66.5
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.2e-53 211.5 152 71.1
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 6.8e-53 211.1 154 66.2
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 6.8e-53 211.1 154 66.2
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 6.8e-53 211.1 156 65.4
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-52 210.3 160 65.6
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.2e-52 210.3 167 68.3
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 1.2e-52 210.3 159 70.4
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 3.4e-52 208.8 150 67.3
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.4e-52 208.8 154 68.2
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 4.4e-52 208.4 156 65.4
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 7.6e-52 207.6 150 66.7
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 7.6e-52 207.6 150 66.7
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 7.6e-52 207.6 150 66.7
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 7.6e-52 207.6 150 66.7
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 7.6e-52 207.6 150 66.7
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.3e-51 206.8 154 66.9
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 2.2e-51 206.1 175 62.3
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 6.4e-51 204.5 166 61.4
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 1.9e-50 203.0 154 65.6
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 7.1e-50 201.1 154 64.3
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 3.5e-49 198.7 154 63.6
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 6.0e-49 198.0 136 71.3
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 7.8e-49 197.6 160 63.1
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 1.0e-48 197.2 155 65.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.7e-48 196.4 222 50.9
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 3.0e-48 195.7 134 73.9
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 3.9e-48 195.3 149 67.1
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 6.6e-48 194.5 155 62.6
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 6.6e-48 194.5 162 61.1
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 1.1e-47 193.7 145 66.9
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.1e-47 193.7 154 61.0
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 5.6e-47 191.4 155 62.6
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 1.6e-46 189.9 197 53.8
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.6e-46 189.9 137 73.0
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 1.1e-45 187.2 143 70.6
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 1.4e-45 186.8 139 68.3
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 2.0e-44 183.0 159 59.1
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 5.8e-44 181.4 105 86.7
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 2.9e-43 179.1 152 59.2
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 3.8e-43 178.7 132 69.7
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 8.4e-43 177.6 147 61.9
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 8.4e-43 177.6 136 64.0
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 2.7e-41 172.6 131 68.7
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 4.6e-41 171.8 138 66.7
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.6e-38 163.3 133 65.4
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 7.6e-36 154.5 86 86.0
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 9.9e-36 154.1 123 65.9
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.3e-35 153.7 100 76.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.0e-32 144.1 78 87.2
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.1e-31 140.6 106 69.8
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 3.3e-31 139.0 110 66.4
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 9.0e-29 131.0 159 45.3
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.7e-27 126.7 124 56.5
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 8.4e-27 124.4 133 56.4
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 2.7e-25 119.4 146 43.8
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.3e-24 116.3 66 81.8
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 3.1e-21 105.9 54 88.9
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 6.9e-21 104.8 80 63.8
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 4.9e-19 98.6 112 49.1
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 1.6e-17 93.6 59 74.6
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 7.9e-17 91.3 53 79.2
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.0e-16 90.9 50 84.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 5.7e-15 85.1 83 57.8
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.7e-14 82.4 84 57.1
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 3.7e-14 82.4 84 57.1
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.5e-12 75.5 49 71.4
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 2.2e-11 73.2 85 34.1


User provided reference genes

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