Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22074 Nelumbo nucifera HOM05D001131 ORTHO05D000972 2.9e-115 418.7 229 100.0
TAR371G0961 Trochodendron aralioides HOM05D001131 ORTHO05D000972 7.1e-29 131.7 139 53.2
MBI11_g23198_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 6.2e-25 118.6 139 51.1
Aqoxy3G01772 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 8.9e-24 114.8 142 47.2
GSVIVG01032948001 Vitis vinifera HOM05D001131 ORTHO05D000972 8.9e-24 114.8 143 52.4
Potri.014G139900 Populus trichocarpa HOM05D001131 ORTHO05D000972 1.2e-23 114.4 138 49.3
Thecc.04G051500 Theobroma cacao HOM05D001131 ORTHO05D000972 2.0e-23 113.6 135 59.3
QL02p068251 Quercus lobata HOM05D001131 ORTHO05D000972 3.4e-23 112.8 139 49.6
VMungo0464G2064 Vigna mungo HOM05D001131 ORTHO05D000972 7.6e-23 111.7 139 50.4
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 9.9e-23 111.3 138 51.4
Ciclev10016745m.g Citrus clementina HOM05D001131 ORTHO05D000972 1.7e-22 110.5 136 52.2
Phvul.004G067900 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 4.1e-21 105.9 139 50.4
Glyma.02G068100 Glycine max HOM05D001131 ORTHO05D000972 3.5e-20 102.8 150 46.7
PSO017G4821 Papaver somniferum HOM05D001131 ORTHO05D000972 7.8e-20 101.7 148 51.4
TAR629G3365 Trochodendron aralioides HOM05D001131 ORTHO05D000972 2.3e-19 100.1 139 45.3
Glyma.16G149600 Glycine max HOM05D001131 ORTHO05D000972 1.1e-18 97.8 144 45.1
PSO478G1201 Papaver somniferum HOM05D001131 ORTHO05D000972 5.6e-18 95.5 148 43.9
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 3.6e-17 92.8 140 44.3
COL.COLO4_13403 Corchorus olitorius HOM05D001131 ORTHO05D000972 1.4e-16 90.9 145 42.1
Manes.11G073300 Manihot esculenta HOM05D001131 ORTHO05D000972 4.0e-16 89.4 141 44.0
Manes.04G096900 Manihot esculenta HOM05D001131 ORTHO05D000972 1.2e-15 87.8 139 43.9
PGR142G2262 Punica granatum HOM05D001131 ORTHO05D000972 3.4e-15 86.3 142 43.7
Cfa007137 Carpinus fangiana HOM05D001131 ORTHO05D000972 5.8e-15 85.5 134 44.8
Eucgr.I01569 Eucalyptus grandis HOM05D001131 ORTHO05D000972 9.9e-15 84.7 145 48.3
CDE05G1753 Ceratophyllum demersum HOM05D001131 ORTHO05D000972 3.8e-14 82.8 103 46.6
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 4.9e-14 82.4 136 38.2
TWI81G1099 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 1.1e-13 81.3 136 44.9
AUR62032534 Chenopodium quinoa HOM05D001131 ORTHO05D000972 1.4e-13 80.9 71 59.2
Lj1g0026347 Lotus japonicus HOM05D001131 ORTHO05D000972 1.9e-13 80.5 136 41.9
Medtr7g084690 Medicago truncatula HOM05D001131 ORTHO05D000972 4.2e-13 79.3 142 40.8
Ca_08233_v3 Cicer arietinum L. HOM05D001131 ORTHO05D000972 5.4e-13 79.0 77 57.1
Atru.chr6.2730 Acer truncatum HOM05D001131 ORTHO05D000972 7.1e-13 78.6 92 53.3
EL10Ac6g13907 Beta vulgaris HOM05D001131 ORTHO05D000972 7.1e-13 78.6 112 42.9
Glyma.19G106400 Glycine max HOM05D001131 ORTHO05D000972 7.1e-13 78.6 140 40.0
Glyma.16G045300 Glycine max HOM05D001131 ORTHO05D000972 4.6e-12 75.9 143 40.6
arahy.Tifrunner.gnm1.ann1.I6Q85W Arachis hypogaea HOM05D001131 ORTHO05D000972 6.0e-12 75.5 103 48.5
CDE05G0443 Ceratophyllum demersum HOM05D001131 ORTHO05D000972 6.0e-12 75.5 79 51.9
VMungo1383G1930 Vigna mungo HOM05D001131 ORTHO05D000972 6.0e-12 75.5 137 40.1
Lalb_Chr24g0402971 Lupinus albus HOM05D001131 ORTHO05D000972 2.3e-11 73.6 74 52.7
Haze_14986 Corylus avellana HOM05D001131 ORTHO05D000972 6.6e-11 72.0 135 38.5
ClCG05G012470 Citrullus lanatus HOM05D001131 ORTHO05D000972 1.5e-10 70.9 140 43.6
TPR.G31652 Trifolium pratense HOM05D001131 ORTHO05D000972 1.5e-10 70.9 126 42.9
TPR.G31655 Trifolium pratense HOM05D001131 ORTHO05D000972 1.5e-10 70.9 140 37.9
TPR.G31661 Trifolium pratense HOM05D001131 ORTHO05D000972 1.5e-10 70.9 142 38.0
TPR.G31665 Trifolium pratense HOM05D001131 ORTHO05D000972 1.9e-10 70.5 65 64.6
Eucgr.G01914 Eucalyptus grandis HOM05D001131 ORTHO05D000972 3.6e-09 66.2 51 64.7
MELO3C014759.2 Cucumis melo HOM05D001131 ORTHO05D000972 4.8e-09 65.9 52 65.4
Os01g0930500 Oryza sativa ssp. japonica HOM05D001131 ORTHO05D000972 6.2e-09 65.5 77 54.5
Psat3g092840 Pisum sativum HOM05D001131 ORTHO05D000972 6.2e-09 65.5 135 36.3
Sed0004223 Sechium edule HOM05D001131 ORTHO05D000972 6.2e-09 65.5 55 61.8
Phvul.001G098600 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 1.1e-08 64.7 139 38.1
Ah.02g128740 Amaranthus hybridus HOM05D001131 ORTHO05D000972 1.4e-08 64.3 74 48.6
Sed0010143 Sechium edule HOM05D001131 ORTHO05D000972 1.4e-08 64.3 53 62.3
Eucgr.G01913 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.7e-06 57.4 49 59.2
Eucgr.L01395 Eucalyptus grandis HOM05D001131 ORTHO05D000972 2.9e-06 56.6 51 58.8
Aqoxy271s001 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 8.4e-06 55.1 102 39.2


User provided reference genes

Program Settings