Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 3.7e-27 124.0 57 100.0
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.5e-25 118.6 57 94.7
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 4.9e-24 113.6 57 93.0
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 6.5e-24 113.2 57 94.7
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 6.5e-24 113.2 57 94.7
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.5e-23 111.3 57 89.5
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 5.1e-21 103.6 56 85.7
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 1.9e-20 101.7 48 97.9
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 4.8e-19 97.1 56 80.4
Gohir.A05G327708 Gossypium hirsutum HOM05D001966 ORTHO05D010127 8.2e-19 96.3 48 93.8
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 8.2e-19 96.3 55 80.0
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 1.8e-18 95.1 44 95.5
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.1e-18 94.0 46 89.1
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 9.0e-18 92.8 48 91.7
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 9.0e-18 92.8 48 91.7
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 9.0e-18 92.8 48 91.7
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.6e-17 91.3 44 93.2
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 1.0e-16 89.4 45 91.1
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.9e-16 87.8 44 93.2
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.9e-16 87.8 44 93.2
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.9e-16 87.8 44 93.2
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 4.2e-15 84.0 44 88.6
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 7.2e-15 83.2 44 86.4
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.2e-15 83.2 44 86.4
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 2.7e-14 81.3 49 83.7
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.9e-14 79.7 42 85.7
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.0e-13 79.3 36 97.2
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 5.1e-13 77.0 44 79.5
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 6.7e-13 76.6 42 83.3
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 2.5e-12 74.7 44 79.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.7e-12 73.6 49 75.5
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 9.7e-12 72.8 44 79.5
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 9.7e-12 72.8 42 81.0
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.2e-11 71.6 46 78.3
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 2.8e-11 71.2 43 79.1
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 3.7e-11 70.9 46 76.1
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 1.4e-10 68.9 39 82.1
Glyma.20G027700 Glycine max HOM05D001966 ORTHO05D010127 3.1e-10 67.8 48 64.6
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 4.1e-10 67.4 34 91.2
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.2e-09 65.9 49 71.4
Sopen03g036740 Solanum pennellii HOM05D001966 ORTHO05D010127 1.5e-09 65.5 36 80.6
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 2.0e-09 65.1 43 74.4
Gorai.007G150800 Gossypium raimondii HOM05D001966 ORTHO05D010127 2.2e-08 61.6 35 82.9
C04p22500 Brassica napus HOM05D004182 ORTHO05D010127 3.8e-08 60.8 35 82.9
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 3.8e-08 60.8 39 71.8
BcaC04g22013 Brassica carinata HOM05D004182 ORTHO05D010127 6.5e-08 60.1 51 62.7
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 6.5e-08 60.1 30 86.7
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 1.9e-07 58.5 37 75.7
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 3.2e-07 57.8 29 93.1
DCAR_007750 Daucus carota HOM05D000444 ORTHO05D000489 7.2e-07 56.6 26 92.3
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 9.4e-07 56.2 33 81.8


User provided reference genes

Program Settings