Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 1.6e-205 719.2 344 100.0
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 9.3e-126 454.1 324 70.7
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 4.1e-121 438.7 320 68.4
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 9.0e-121 437.6 314 66.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.5e-120 436.8 316 67.1
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.6e-120 436.0 326 66.0
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.1e-118 430.6 314 68.5
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 4.6e-117 425.2 309 66.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.8e-116 423.3 312 65.4
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 3.9e-116 422.2 318 64.8
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 5.7e-115 418.3 323 66.9
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 7.4e-115 417.9 313 63.6
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 9.7e-115 417.5 316 64.6
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 9.7e-115 417.5 317 64.7
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.3e-114 417.2 316 64.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 2.8e-114 416.0 316 64.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 3.7e-114 415.6 314 65.0
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 6.3e-114 414.8 312 64.7
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 3.1e-113 412.5 289 66.4
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.4e-112 409.1 329 62.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.5e-112 408.7 351 58.4
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 7.7e-112 407.9 300 64.7
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 7.7e-112 407.9 317 62.1
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 5.5e-110 401.7 321 64.2
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 9.4e-110 401.0 351 58.4
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 3.9e-108 395.6 354 58.2
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.1e-107 394.0 309 61.8
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.5e-107 392.9 292 64.0
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 4.3e-107 392.1 292 64.0
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-106 390.2 292 63.7
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.7e-106 390.2 312 59.9
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.4e-105 387.1 311 61.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.8e-105 386.7 303 62.0
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 7.7e-104 381.3 333 58.0
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 7.7e-104 381.3 336 57.1
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.0e-103 380.9 261 67.4
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 2.9e-103 379.4 292 62.3
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 5.5e-102 375.2 316 58.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.7e-101 372.9 312 59.3
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.7e-101 372.1 312 59.3
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.0e-100 369.4 313 59.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 5.7e-99 365.2 289 60.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 6.3e-98 361.7 290 61.4
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.1e-97 359.0 295 60.0
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.6e-96 357.1 285 59.6
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.5e-94 350.5 231 71.9
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.2e-93 347.4 287 57.1
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.1e-93 346.7 318 53.8
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 8.0e-93 344.7 288 58.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 1.0e-92 344.4 291 59.5
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 5.2e-92 342.0 316 54.4
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 8.8e-92 341.3 287 59.6
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.5e-91 340.5 292 58.6
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.3e-91 339.3 296 56.4
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 5.7e-91 338.6 299 55.5
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.8e-90 336.3 261 60.5
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 3.7e-90 335.9 257 63.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.1e-89 334.3 292 56.8
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.4e-89 334.0 290 56.6
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 1.8e-89 333.6 314 52.2
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.8e-89 333.6 292 57.9
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.4e-89 333.2 287 57.5
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 2.4e-89 333.2 299 53.2
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.1e-89 332.8 299 55.9
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.1e-89 332.8 298 56.7
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 4.1e-89 332.4 318 55.3
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 9.1e-89 331.3 315 53.3
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 9.1e-89 331.3 314 53.2
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 2.0e-88 330.1 286 55.9
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.5e-88 328.9 299 55.5
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 5.9e-88 328.6 300 54.0
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 7.7e-88 328.2 296 54.7
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.0e-87 327.8 284 56.7
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.3e-87 327.4 231 66.7
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.2e-87 326.6 299 55.5
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.9e-87 326.2 357 49.9
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.9e-87 326.2 261 60.5
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 5.0e-87 325.5 312 51.6
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.5e-86 323.9 265 62.6
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.9e-86 323.6 309 54.0
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.9e-86 323.6 298 54.4
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 4.2e-86 322.4 310 53.9
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 2.1e-85 320.1 290 55.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.0e-84 317.8 300 54.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.0e-84 317.8 300 54.3
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.0e-84 315.8 318 53.5
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 6.8e-84 315.1 286 56.6
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.7e-82 310.5 325 50.8
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.8e-81 307.0 210 67.6
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.4e-81 306.6 286 55.2
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 2.2e-79 300.1 308 50.6
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 4.2e-78 295.8 264 53.8
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 6.1e-69 265.4 313 43.5
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.0e-68 264.6 289 47.4
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.2e-64 251.1 273 48.7
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 4.7e-61 239.2 211 55.0
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 3.1e-44 183.3 170 56.5
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.5e-43 181.0 320 38.4
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.3e-42 177.9 139 63.3
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.3e-39 167.9 139 57.6
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.6e-35 153.7 127 58.3
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.2e-32 144.8 123 56.1
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.2e-32 144.8 236 35.6
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 7.3e-30 135.6 261 35.2
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 4.0e-28 129.8 86 69.8
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.2e-27 128.3 86 68.6
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-25 121.7 86 65.1
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 7.1e-25 119.0 116 48.3
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.6e-24 117.9 141 41.8
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-14 84.3 58 63.8
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.6e-13 81.3 102 43.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.6e-11 73.9 131 39.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.0e-10 72.0 51 56.9
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 1.8e-07 61.2 124 28.2
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 8.7e-07 58.9 38 73.7
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.5e-06 58.2 110 31.8
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.9e-06 57.8 38 71.1
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.5e-06 57.4 196 27.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.3e-06 56.6 113 31.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 7.4e-06 55.8 179 26.3
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 9.6e-06 55.5 142 23.9


User provided reference genes

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