Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.7e-124 446.8 224 100.0
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.3e-115 417.5 224 90.6
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.1e-82 308.5 172 87.2
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.0e-81 306.2 223 69.1
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.7e-80 303.1 226 64.6
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 5.0e-80 301.6 223 65.9
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 2.5e-79 299.3 223 67.7
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 2.5e-79 299.3 219 66.7
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 8.0e-78 294.3 228 64.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 8.9e-77 290.8 220 66.8
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.4e-76 288.9 216 66.2
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 4.4e-76 288.5 227 63.0
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 7.5e-76 287.7 220 65.9
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 7.5e-76 287.7 219 63.9
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 2.9e-75 285.8 220 61.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.7e-75 285.4 216 63.4
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 2.4e-74 282.7 220 64.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.1e-74 282.0 194 73.2
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 1.2e-73 280.4 220 59.5
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.2e-73 280.4 211 64.9
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 2.0e-73 279.6 220 59.5
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 6.0e-73 278.1 222 61.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.3e-72 276.9 220 58.6
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 1.3e-72 276.9 219 60.3
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 5.0e-72 275.0 223 61.4
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 1.9e-71 273.1 221 58.8
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 3.3e-71 272.3 224 61.2
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.3e-71 272.3 223 60.1
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 9.5e-71 270.8 211 64.5
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.4e-69 266.9 224 59.4
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 8.9e-69 264.2 251 57.8
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 8.9e-69 264.2 221 59.3
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 8.9e-69 264.2 223 60.1
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.2e-68 263.8 223 59.6
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 5.8e-68 261.5 226 60.2
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 5.8e-68 261.5 249 57.0
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 9.8e-68 260.8 222 60.4
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.3e-67 260.4 220 60.5
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 3.7e-67 258.8 220 60.0
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 4.9e-67 258.5 190 64.7
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 6.4e-67 258.1 223 59.2
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.9e-66 256.5 219 58.9
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 4.1e-66 255.4 222 59.5
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 4.1e-66 255.4 222 57.7
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 5.4e-66 255.0 221 58.4
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 5.4e-66 255.0 229 59.4
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 7.1e-66 254.6 224 56.7
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.2e-65 253.8 223 59.2
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.2e-65 253.8 224 59.8
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 6.0e-65 251.5 219 59.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 6.0e-65 251.5 223 56.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 7.8e-65 251.1 222 56.8
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.0e-64 250.8 219 59.4
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 3.0e-64 249.2 220 57.3
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 3.0e-64 249.2 219 59.8
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.9e-64 248.8 221 56.1
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.9e-64 248.8 223 55.6
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 5.1e-64 248.4 223 57.8
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.1e-63 247.3 214 57.9
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.5e-63 246.9 219 60.3
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 1.5e-63 246.9 215 57.7
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.9e-63 246.5 223 55.6
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.3e-63 245.4 219 55.3
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 5.6e-63 245.0 219 59.8
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.3e-63 244.6 225 57.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 9.5e-63 244.2 189 61.9
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.2e-62 243.8 174 69.0
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.6e-62 243.4 219 57.1
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 2.1e-62 243.0 227 58.6
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 2.8e-62 242.7 215 55.8
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 4.7e-62 241.9 219 57.5
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.1e-61 240.7 219 56.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.3e-61 239.6 218 56.9
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 2.3e-61 239.6 229 55.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 6.8e-61 238.0 228 53.5
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 6.8e-61 238.0 237 54.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 9.9e-60 234.2 222 55.9
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.4e-58 230.3 215 54.4
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 3.2e-58 229.2 210 56.2
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 9.2e-58 227.6 213 55.9
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 9.2e-58 227.6 213 55.9
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.6e-57 226.9 216 51.4
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 6.0e-57 224.9 220 53.6
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.0e-56 224.2 224 54.0
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.3e-56 223.0 167 65.9
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 6.2e-54 214.9 175 60.6
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 2.2e-51 206.5 179 59.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.1e-50 204.1 223 50.7
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 7.1e-50 201.4 207 49.8
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 6.0e-49 198.4 169 62.1
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 3.9e-48 195.7 188 52.1
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 8.7e-48 194.5 209 50.7
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 9.0e-45 184.5 184 48.4
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.2e-44 184.1 156 55.8
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 2.0e-44 183.3 228 49.1
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 3.4e-44 182.6 136 65.4
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 8.7e-40 167.9 215 46.0
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.6e-38 163.7 187 45.5
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 9.0e-37 157.9 167 47.9
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.2e-36 157.5 160 53.8
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-34 151.0 75 92.0
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.9e-34 150.2 150 54.7
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 3.2e-34 149.4 140 56.4
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.2e-33 147.5 173 46.2
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.1e-29 134.4 102 58.8
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-24 115.9 57 94.7
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.1e-22 110.2 109 50.5
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-21 107.5 151 45.7
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.6e-17 92.8 147 34.0
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 6.7e-16 88.6 61 60.7
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.5e-15 87.4 71 59.2
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 7.4e-15 85.1 177 33.3
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.1e-10 71.2 83 47.0
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 3.9e-08 62.8 82 46.3
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.7e-07 58.2 39 64.1
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.2e-06 57.0 159 25.8
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.8e-06 56.6 40 60.0
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.7e-06 56.2 38 65.8
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 8.2e-06 55.1 79 41.8


User provided reference genes

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