Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn3g20358 Nelumbo nucifera HOM05D001106 ORTHO05D000910 5.3e-47 190.7 94 100.0
Nn4g23831 Nelumbo nucifera HOM05D001106 ORTHO05D000910 3.8e-45 184.5 94 96.8
TAR622G0070 Trochodendron aralioides HOM05D001106 ORTHO05D000910 7.9e-19 97.1 96 59.4
TAR371G0621 Trochodendron aralioides HOM05D001106 ORTHO05D000910 6.7e-18 94.0 79 57.0
Nn3g17837 Nelumbo nucifera HOM05D001106 ORTHO05D000910 9.7e-17 90.1 98 58.2
PSO017G6340 Papaver somniferum HOM05D001106 ORTHO05D000910 2.6e-14 82.0 88 55.7
PSO478G1997 Papaver somniferum HOM05D001106 ORTHO05D000910 2.6e-14 82.0 88 55.7
Lj9A426T60 Lonicera japonica HOM05D001106 ORTHO05D000910 4.2e-12 74.7 84 51.2
QL10p025240 Quercus lobata HOM05D001106 ORTHO05D000910 3.6e-11 71.6 93 51.6
GSVIVG01011897001 Vitis vinifera HOM05D001106 ORTHO05D000910 6.1e-11 70.9 80 51.2
DCAR_011541 Daucus carota HOM05D001106 ORTHO05D000910 3.0e-10 68.6 85 45.9
TAR374G0409 Trochodendron aralioides HOM05D001106 ORTHO05D000910 5.1e-10 67.8 93 47.3
QL01p042619 Quercus lobata HOM05D001106 ORTHO05D000910 8.8e-10 67.0 96 44.8
CSS0038569 Camellia sinensis var. sinensis HOM05D001106 ORTHO05D000910 1.1e-09 66.6 96 46.9
MBI13_g09690_MAGBIO Magnolia biondii HOM05D001106 ORTHO05D000910 1.1e-09 66.6 74 54.1
Manes.05G137600 Manihot esculenta HOM05D001106 ORTHO05D000910 2.0e-09 65.9 90 43.3
Actinidia16651 Actinidia chinensis HOM05D001106 ORTHO05D000910 2.5e-09 65.5 75 45.3
Hma1.2p1_0592F.1_g185370 Hydrangea macrophylla HOM05D001106 ORTHO05D000910 9.7e-09 63.5 68 48.5
Cfa018596 Carpinus fangiana HOM05D001106 ORTHO05D000910 1.3e-08 63.2 71 54.9
Duzib251G0361 Durio zibethinus HOM05D001106 ORTHO05D000910 1.3e-08 63.2 96 42.7
Eucgr.G02322 Eucalyptus grandis HOM05D001106 ORTHO05D000910 1.3e-08 63.2 98 46.9
Hma1.2p1_2942F.1_g330630 Hydrangea macrophylla HOM05D001106 ORTHO05D000910 1.7e-08 62.8 64 50.0
Lj6A759T75 Lonicera japonica HOM05D001106 ORTHO05D000910 1.7e-08 62.8 93 40.9
Aqoxy3G00303 Aquilegia oxysepala HOM05D001106 ORTHO05D000910 2.2e-08 62.4 89 48.3
CDE05G2786 Ceratophyllum demersum HOM05D001106 ORTHO05D000910 2.2e-08 62.4 67 58.2
Duzib248G1208 Durio zibethinus HOM05D001106 ORTHO05D000910 2.8e-08 62.0 94 40.4
MSTRG.2236 Avicennia marina HOM05D001106 ORTHO05D000910 3.7e-08 61.6 96 45.8
Dinv10699 Davidia involucrata HOM05D001106 ORTHO05D000910 4.8e-08 61.2 86 47.7
Dinv28098 Davidia involucrata HOM05D001106 ORTHO05D000910 4.8e-08 61.2 71 53.5
COL.COLO4_20602 Corchorus olitorius HOM05D001106 ORTHO05D000910 1.1e-07 60.1 71 47.9
DCAR_015140 Daucus carota HOM05D001106 ORTHO05D000910 1.8e-07 59.3 86 41.9
TWI79G1170 Tripterygium wilfordii HOM05D001106 ORTHO05D000910 1.8e-07 59.3 86 44.2
CSS0017546 Camellia sinensis var. sinensis HOM05D001106 ORTHO05D000910 4.1e-07 58.2 78 46.2
Thecc.02G231000 Theobroma cacao HOM05D001106 ORTHO05D000910 4.1e-07 58.2 77 48.1
Actinidia35086 Actinidia chinensis HOM05D001106 ORTHO05D000910 5.3e-07 57.8 93 40.9
FAN22G1861 Fragaria x ananassa HOM05D001106 ORTHO05D000910 5.3e-07 57.8 70 57.1
SalBow8G1399 Salvia bowleyana HOM05D001106 ORTHO05D000910 5.3e-07 57.8 75 48.0
Haze_17481 Corylus avellana HOM05D001106 ORTHO05D000910 6.9e-07 57.4 70 55.7
FAN07G0493 Fragaria x ananassa HOM05D001106 ORTHO05D000910 6.9e-07 57.4 74 55.4
CiPaw.15G085100 Carya illinoinensis HOM05D001106 ORTHO05D000910 9.1e-07 57.0 77 48.1
SalBow8G2735 Salvia bowleyana HOM05D001106 ORTHO05D000910 1.5e-06 56.2 83 43.4
CDE05G2772 Ceratophyllum demersum HOM05D001106 ORTHO05D000910 4.5e-06 54.7 73 53.4
Oeu050163.1 Olea europaea HOM05D001106 ORTHO05D000910 4.5e-06 54.7 89 38.2
CiPaw.16G085800 Carya illinoinensis HOM05D001106 ORTHO05D000910 5.9e-06 54.3 102 43.1
RcHm_v2.0_Chr4g0435191 Rosa chinensis HOM05D001106 ORTHO05D000910 7.7e-06 53.9 97 44.3
Sabra10G0095000 Salix brachista HOM05D001106 ORTHO05D000910 7.7e-06 53.9 80 46.2


User provided reference genes

Program Settings