Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn029s41580 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
Nn349s46479 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.1e-23 109.8 57 100.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.5e-22 107.5 57 98.2
PSO478G1394 Papaver somniferum HOM05D001070 ORTHO05D002096 1.0e-21 105.9 57 96.5
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 5.1e-21 103.6 54 98.1
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 5.7e-20 100.1 55 94.5
CAN.G929.2 Capsicum annuum HOM05D001070 ORTHO05D002096 7.4e-20 99.8 57 91.2
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.4e-20 99.8 57 91.2
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.4e-20 99.8 57 91.2
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.4e-20 99.8 57 91.2
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.4e-20 99.8 57 91.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 9.7e-20 99.4 55 94.5
HanXRQChr06g0182961 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-19 99.0 55 94.5
HanXRQChr09g0258561 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-19 99.0 55 94.5
HanXRQChr14g0430911 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-19 99.0 55 94.5
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.3e-19 99.0 57 87.7
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.3e-19 99.0 57 87.7
HanXRQChr11g0347371 Helianthus annuus HOM05D001070 ORTHO05D002096 2.2e-19 98.2 55 92.7
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.2e-19 98.2 57 89.5
BraSC59t46505Z Brassica rapa HOM05D001070 ORTHO05D002096 2.8e-19 97.8 57 86.0
CSS0027235 Camellia sinensis var. sinensis HOM05D001070 ORTHO05D002096 4.8e-19 97.1 56 91.1
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10013927m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10027641m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.3 55 89.1
AL5G20280 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
C09p40290 Brassica napus HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC29t60542H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC48t46326Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-18 95.9 60 85.0
RcHm_v2.0_Chr7g0221181 Rosa chinensis HOM05D001070 ORTHO05D002096 1.4e-18 95.5 55 90.9
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 1.8e-18 95.1 55 89.1
HanXRQChr11g0336631 Helianthus annuus HOM05D001070 ORTHO05D002096 1.8e-18 95.1 55 89.1
Solyc05g047440.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.8e-18 95.1 57 87.7
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 2.4e-18 94.7 55 87.3
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 3.1e-18 94.4 55 89.1
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.1e-18 94.4 55 89.1
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.1e-18 94.4 57 86.0
Nn2g13236 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.1e-18 94.0 57 86.0
ATMG00370 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 5.3e-18 93.6 60 83.3
CARHR282770 Cardamine hirsuta HOM05D001070 ORTHO05D002096 5.3e-18 93.6 60 83.3
CANSAT78G0545 Cannabis sativa HOM05D001070 ORTHO05D002096 1.5e-17 92.0 55 85.5
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.5e-17 92.0 57 80.7
AT2G07739 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 2.6e-17 91.3 60 81.7
Oeu054714.1 Olea europaea HOM05D001070 ORTHO05D002096 2.6e-17 91.3 57 84.2
Solyc11g044670.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-17 91.3 57 86.0
Solyc11g021180.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.4e-17 90.9 54 87.0
Sed0021842 Sechium edule HOM05D001070 ORTHO05D002096 5.9e-17 90.1 49 93.9
Phvul.007G021600 Phaseolus vulgaris HOM05D001070 ORTHO05D002096 1.0e-16 89.4 57 77.2
HanXRQChr12g0376641 Helianthus annuus HOM05D001070 ORTHO05D002096 1.3e-16 89.0 55 85.5
MSTRG.27595 Avicennia marina HOM05D001070 ORTHO05D002096 1.7e-16 88.6 48 91.7
C03p28320 Brassica napus HOM05D001070 ORTHO05D002096 1.7e-16 88.6 56 80.4
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-16 88.6 48 93.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-16 88.6 48 93.8
Lsat_1_v5_gn_6_14501 Lactuca sativa HOM05D001070 ORTHO05D002096 2.9e-16 87.8 56 83.9
Lalb_Chr07g0191691 Lupinus albus HOM05D001070 ORTHO05D002096 2.9e-16 87.8 57 77.2
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 2.9e-16 87.8 57 77.2
Manes.11G122808 Manihot esculenta HOM05D001070 ORTHO05D002096 2.9e-16 87.8 55 81.8
Oeu038907.1 Olea europaea HOM05D001070 ORTHO05D002096 5.0e-16 87.0 53 83.0
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.5e-16 86.7 50 88.0
Migut.D01388 Erythranthe guttata HOM05D001070 ORTHO05D002096 1.4e-15 85.5 52 84.6
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.9e-15 85.1 55 81.8
Glyma.02G189000 Glycine max HOM05D001070 ORTHO05D002096 2.5e-15 84.7 52 82.7
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.5e-15 84.7 55 81.8
Medtr5g080950 Medicago truncatula HOM05D001070 ORTHO05D002096 2.5e-15 84.7 57 71.9
Oeu015126.1 Olea europaea HOM05D001070 ORTHO05D002096 2.5e-15 84.7 53 79.2
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-15 83.6 44 95.5
Gorai.013G183200 Gossypium raimondii HOM05D001070 ORTHO05D002096 9.3e-15 82.8 56 78.6
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 1.2e-14 82.4 42 95.2
Gohir.D06G105240 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.6e-14 82.0 55 78.2
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.6e-14 82.0 42 97.6
Gohir.D13G124850 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.1e-14 81.6 59 76.3
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.7e-14 81.3 55 78.2
Gohir.D13G161333 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.7e-14 81.3 56 76.8
Atru.chr8.922 Acer truncatum HOM05D001070 ORTHO05D002096 7.9e-14 79.7 42 95.2
Oeu012767.1 Olea europaea HOM05D001070 ORTHO05D002096 7.9e-14 79.7 52 78.8
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 7.9e-14 79.7 57 71.9
Lju5009P0T27 Lonicera japonica HOM05D001070 ORTHO05D002096 1.0e-13 79.3 57 73.7
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 1.8e-13 78.6 42 92.9
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.8e-13 78.6 59 72.9
Phvul.009G122100 Phaseolus vulgaris HOM05D001070 ORTHO05D002096 2.3e-13 78.2 49 79.6
BolC2t10605H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BolSC29t60513H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BolSC35t60685H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BolSC37t60800H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BolSC45t60902H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BolSC47t61060H Brassica oleracea HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BraSC143t45653Z Brassica rapa HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
BraSC59t46545Z Brassica rapa HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 6.7e-13 76.6 45 91.1
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 6.7e-13 76.6 57 66.7
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.7e-13 76.6 42 92.9
PSO541G5077 Papaver somniferum HOM05D001070 ORTHO05D002096 8.8e-13 76.3 39 97.4
HanXRQChr00c0561g0575891 Helianthus annuus HOM05D001070 ORTHO05D002096 1.5e-12 75.5 40 95.0
HanXRQChr17g0569781 Helianthus annuus HOM05D001070 ORTHO05D002096 1.5e-12 75.5 40 95.0
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 2.5e-12 74.7 40 92.5
CSS0017227 Camellia sinensis var. sinensis HOM05D001070 ORTHO05D002096 3.3e-12 74.3 42 85.7
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 3.3e-12 74.3 40 92.5
ClCG04G001030 Citrullus lanatus HOM05D001070 ORTHO05D002096 4.3e-12 73.9 41 90.2
HanXRQChr13g0416561 Helianthus annuus HOM05D001070 ORTHO05D002096 4.3e-12 73.9 56 73.2
Lsat_1_v5_gn_2_31300 Lactuca sativa HOM05D001070 ORTHO05D002096 7.4e-12 73.2 47 80.9
Lalb_Chr16g0388601 Lupinus albus HOM05D001070 ORTHO05D002096 7.4e-12 73.2 42 85.7
arahy.Tifrunner.gnm1.ann1.0FQ6JR Arachis hypogaea HOM05D001070 ORTHO05D002096 9.7e-12 72.8 39 87.2
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 9.7e-12 72.8 40 90.0
Hund08795 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund17849 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund27460 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund27754 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund27829 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund27834 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund28436 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund28590 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund28611 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund29401 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund29519 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund29746 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
Hund29772 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.7e-11 72.0 55 72.7
BolSC29t60552H Brassica oleracea HOM05D001070 ORTHO05D002096 2.8e-11 71.2 45 86.7
Nn5g27511 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.8e-11 71.2 44 86.4
Hund22090 Selenicereus undatus HOM05D001070 ORTHO05D002096 6.3e-11 70.1 54 70.4
Solyc11g039900.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-11 70.1 41 82.9
BolSC43t60809H Brassica oleracea HOM05D001070 ORTHO05D002096 8.2e-11 69.7 42 88.1
Medtr2126s0020 Medicago truncatula HOM05D001070 ORTHO05D002096 8.2e-11 69.7 44 84.1
arahy.Tifrunner.gnm1.ann1.13XSJR Arachis hypogaea HOM05D001070 ORTHO05D002096 1.1e-10 69.3 39 84.6
DCAR_011103 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-10 69.3 45 86.7
Lalb_Chr00c06g0404661 Lupinus albus HOM05D001070 ORTHO05D002096 1.4e-10 68.9 42 81.0
Lalb_Chr13g0293691 Lupinus albus HOM05D001070 ORTHO05D002096 1.4e-10 68.9 42 81.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.4e-10 68.2 58 65.5
PGSC0003DMG400010649 Solanum tuberosum HOM05D001070 ORTHO05D002096 2.4e-10 68.2 38 92.1
AT2G07565 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 3.1e-10 67.8 45 82.2
Psat1g157760 Pisum sativum HOM05D001070 ORTHO05D002096 3.1e-10 67.8 58 60.3
CiPaw.12G052500 Carya illinoinensis HOM05D001070 ORTHO05D002096 5.3e-10 67.0 47 74.5
Gohir.A09G216580 Gossypium hirsutum HOM05D001070 ORTHO05D002096 5.3e-10 67.0 40 82.5
Glyma.01G114300 Glycine max HOM05D001070 ORTHO05D002096 9.1e-10 66.2 35 88.6
Gorai.011G154800 Gossypium raimondii HOM05D001070 ORTHO05D002096 9.1e-10 66.2 40 80.0
Sc10g0007490 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.5e-09 65.5 43 76.7
Solyc01g017250.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-09 64.7 36 86.1
ClCG06G008920 Citrullus lanatus HOM05D000806 ORTHO05D002324 3.4e-09 64.3 33 97.0
Psat0s2011g0040 Pisum sativum HOM05D000729 ORTHO05D001063 3.4e-09 64.3 53 60.4
Gohir.D10G139001 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.0e-08 62.8 40 77.5
Oeu046574.1 Olea europaea HOM05D001070 ORTHO05D002096 1.0e-08 62.8 41 80.5
Hund01218 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.0e-08 62.8 46 73.9
Hund28771 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.0e-08 62.8 46 73.9
Hund29267 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.0e-08 62.8 46 73.9
Hund29396 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.0e-08 62.8 46 73.9
MELO3C008746.2 Cucumis melo HOM05D001070 ORTHO05D002096 1.3e-08 62.4 32 90.6
Gohir.A13G082266 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.9e-08 61.2 40 75.0
BolC2t10608H Brassica oleracea HOM05D001070 ORTHO05D002096 5.0e-08 60.5 37 86.5
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 6.5e-08 60.1 32 93.8
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 8.5e-08 59.7 41 70.7
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.5e-07 58.2 32 84.4
Gorai.009G405100 Gossypium raimondii HOM05D001070 ORTHO05D002096 5.5e-07 57.0 47 66.0
Hund11512 Selenicereus undatus HOM05D001070 ORTHO05D002096 5.5e-07 57.0 55 63.6


User provided reference genes

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