Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15325 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-38 162.9 118 100.0
Nn2g15936 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-38 162.9 118 100.0
Nn2g15937 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-38 162.9 118 100.0
Nn389s46550 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-38 162.9 118 100.0
Nn2g15962 Nelumbo nucifera HOM05D000311 ORTHO05D000183 8.1e-21 104.0 118 50.8
Nn2g15993 Nelumbo nucifera HOM05D000311 ORTHO05D000183 2.7e-16 89.0 121 74.4
Nn2g15943 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.1e-12 77.0 35 94.3
Nitab4.5_0003058g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 1.1e-12 77.0 119 49.6
Nn2g15942 Nelumbo nucifera HOM05D000311 ORTHO05D000183 5.3e-12 74.7 43 83.7
QL04p004418 Quercus lobata HOM05D000311 ORTHO05D000183 5.3e-12 74.7 120 68.3
Nn2g15948 Nelumbo nucifera HOM05D000311 ORTHO05D000183 6.9e-12 74.3 121 69.4
Nn2g15953 Nelumbo nucifera HOM05D000311 ORTHO05D000183 6.9e-12 74.3 121 69.4
QL04p004370 Quercus lobata HOM05D000311 ORTHO05D000183 6.9e-12 74.3 120 67.5
Gohir.D06G050950 Gossypium hirsutum HOM05D000311 ORTHO05D000183 9.9e-11 70.5 118 52.5
Nn2g15974 Nelumbo nucifera HOM05D000311 ORTHO05D000183 9.9e-11 70.5 35 88.6
Oeu010082.1 Olea europaea HOM05D000311 ORTHO05D000183 1.7e-10 69.7 114 65.8
HanXRQChr04g0097591 Helianthus annuus HOM05D000311 ORTHO05D000183 2.9e-10 68.9 116 37.1
QL04p003552 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-09 66.6 120 65.0
QL04p004403 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-09 66.6 116 54.3
Nitab4.5_0006816g0040 Nicotiana tabacum HOM05D000311 ORTHO05D000183 1.9e-09 66.2 118 65.3
QL04p004735 Quercus lobata HOM05D000311 ORTHO05D000183 1.9e-09 66.2 120 65.0
Dinv19809 Davidia involucrata HOM05D000311 ORTHO05D000183 2.4e-09 65.9 121 66.1
Dinv35864 Davidia involucrata HOM05D000311 ORTHO05D000183 2.4e-09 65.9 121 66.1
CiPaw.15G113300 Carya illinoinensis HOM05D000311 ORTHO05D000183 5.5e-09 64.7 115 67.8
Peaxi162Scf00454g00117 Petunia axillaris HOM05D000311 ORTHO05D000183 5.5e-09 64.7 115 53.9
Dinv01684 Davidia involucrata HOM05D000311 ORTHO05D000183 7.1e-09 64.3 121 65.3
Nn8g39596 Nelumbo nucifera HOM05D000311 ORTHO05D000183 7.1e-09 64.3 119 64.7
CiPaw.15G114400 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.2e-08 63.5 119 65.5
Manes.11G060199 Manihot esculenta HOM05D000311 ORTHO05D000183 1.2e-08 63.5 115 63.5
QL04p042807 Quercus lobata HOM05D000311 ORTHO05D000183 1.2e-08 63.5 120 65.8
QL93p0073_0079 Quercus lobata HOM05D000311 ORTHO05D000183 1.2e-08 63.5 119 47.9
Nn8g39655 Nelumbo nucifera HOM05D000311 ORTHO05D000183 2.1e-08 62.8 120 64.2
Actinidia04232 Actinidia chinensis HOM05D000311 ORTHO05D000183 2.7e-08 62.4 112 54.5
Actinidia21924 Actinidia chinensis HOM05D000311 ORTHO05D000183 2.7e-08 62.4 121 63.6
Duzib212G0286 Durio zibethinus HOM05D000311 ORTHO05D000183 2.7e-08 62.4 121 62.8
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 3.5e-08 62.0 118 59.3
Gorai.013G236800 Gossypium raimondii HOM05D000311 ORTHO05D000183 3.5e-08 62.0 116 63.8
Dinv35861 Davidia involucrata HOM05D000311 ORTHO05D000183 4.6e-08 61.6 121 64.5
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 4.6e-08 61.6 121 62.8
MBI18_g12154_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 4.6e-08 61.6 104 71.2
QL04p003704 Quercus lobata HOM05D000311 ORTHO05D000183 6.0e-08 61.2 120 65.0
QL04p003897 Quercus lobata HOM05D000311 ORTHO05D000183 6.0e-08 61.2 120 65.0
Hma1.2p1_0949F.1_g240700 Hydrangea macrophylla HOM05D000311 ORTHO05D000183 7.9e-08 60.8 113 35.4
CSS0001163 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.0e-07 60.5 121 62.8
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.0e-07 60.5 113 41.6
Eucgr.C04317 Eucalyptus grandis HOM05D000311 ORTHO05D000183 1.0e-07 60.5 110 35.5
Dinv36446 Davidia involucrata HOM05D000311 ORTHO05D000183 1.3e-07 60.1 119 62.2
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 1.3e-07 60.1 119 62.2
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 1.3e-07 60.1 119 62.2
Duzib212G0447 Durio zibethinus HOM05D000311 ORTHO05D000183 1.3e-07 60.1 121 61.2
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 1.8e-07 59.7 115 61.7
Duzib212G1037 Durio zibethinus HOM05D000311 ORTHO05D000183 1.8e-07 59.7 121 61.2
Gohir.D13G207900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.8e-07 59.7 116 62.9
QL04p003852 Quercus lobata HOM05D000311 ORTHO05D000183 1.8e-07 59.7 119 64.7
CiPaw.15G116400 Carya illinoinensis HOM05D000311 ORTHO05D000183 2.3e-07 59.3 115 66.1
Duzib212G0289 Durio zibethinus HOM05D000311 ORTHO05D000183 3.0e-07 58.9 121 61.2
Gohir.D04G133300 Gossypium hirsutum HOM05D000053 ORTHO05D000448 3.0e-07 58.9 111 64.0
Duzib212G0424 Durio zibethinus HOM05D000311 ORTHO05D000183 3.9e-07 58.5 118 63.6
Duzib212G0774 Durio zibethinus HOM05D000311 ORTHO05D000183 3.9e-07 58.5 121 61.2
Nn2g15951 Nelumbo nucifera HOM05D000311 ORTHO05D000183 3.9e-07 58.5 36 80.6
QL93p2015_0025 Quercus lobata HOM05D000311 ORTHO05D000183 3.9e-07 58.5 121 62.0
CiPaw.15G114500 Carya illinoinensis HOM05D000311 ORTHO05D000183 5.1e-07 58.2 115 65.2
Duzib184G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 5.1e-07 58.2 121 61.2
Duzib214G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 5.1e-07 58.2 121 61.2
MBI18_g17975_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 5.1e-07 58.2 114 64.9
MBI18_g41218_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 5.1e-07 58.2 114 64.9
Duzib212G0223 Durio zibethinus HOM05D000311 ORTHO05D000183 6.7e-07 57.8 121 61.2
Duzib212G0384 Durio zibethinus HOM05D000311 ORTHO05D000183 6.7e-07 57.8 121 61.2
Duzib212G0464 Durio zibethinus HOM05D000311 ORTHO05D000183 6.7e-07 57.8 121 61.2
Duzib212G0987 Durio zibethinus HOM05D000311 ORTHO05D000183 6.7e-07 57.8 121 61.2
Gohir.A13G202300 Gossypium hirsutum HOM05D000311 ORTHO05D000183 6.7e-07 57.8 116 62.1
QL04p004476 Quercus lobata HOM05D000311 ORTHO05D000183 6.7e-07 57.8 119 62.2
QL04p004575 Quercus lobata HOM05D000311 ORTHO05D000183 6.7e-07 57.8 120 62.5
QL04p004701 Quercus lobata HOM05D000311 ORTHO05D000183 6.7e-07 57.8 120 62.5
arahy.Tifrunner.gnm1.ann1.ND6QY9 Arachis hypogaea HOM05D000311 ORTHO05D000183 8.7e-07 57.4 120 63.3
arahy.Tifrunner.gnm1.ann1.X55N05 Arachis hypogaea HOM05D000311 ORTHO05D000183 8.7e-07 57.4 120 63.3
CiPaw.04G177700 Carya illinoinensis HOM05D000311 ORTHO05D000183 8.7e-07 57.4 113 66.4
Dinv19812 Davidia involucrata HOM05D000311 ORTHO05D000183 8.7e-07 57.4 121 62.8
Duzib212G0835 Durio zibethinus HOM05D000311 ORTHO05D000183 8.7e-07 57.4 121 62.0
Gohir.D04G133100 Gossypium hirsutum HOM05D000053 ORTHO05D000448 8.7e-07 57.4 109 64.2
Duzib019G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-06 57.0 121 62.0
Duzib184G0004 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-06 57.0 121 62.0
Duzib214G0002 Durio zibethinus HOM05D000311 ORTHO05D000183 1.1e-06 57.0 121 62.0
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 1.1e-06 57.0 121 60.3
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 1.5e-06 56.6 34 76.5
Nn2g15980 Nelumbo nucifera HOM05D000311 ORTHO05D000183 1.5e-06 56.6 116 44.0
QL93p0073_0107 Quercus lobata HOM05D000311 ORTHO05D000183 1.5e-06 56.6 120 61.7
Haze_16587 Corylus avellana HOM05D000311 ORTHO05D000183 1.9e-06 56.2 119 62.2
Gohir.A04G094000 Gossypium hirsutum HOM05D000053 ORTHO05D000448 1.9e-06 56.2 111 64.0
Duzib212G0107 Durio zibethinus HOM05D000311 ORTHO05D000183 2.5e-06 55.8 119 61.3
Gohir.A06G188366 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.5e-06 55.8 113 32.7
Glyma.07G144100 Glycine max HOM05D000311 ORTHO05D000183 3.3e-06 55.5 116 62.9
Glyma.18G195200 Glycine max HOM05D000311 ORTHO05D000183 3.3e-06 55.5 116 62.1
Gorai.012G117200 Gossypium raimondii HOM05D000053 ORTHO05D000448 3.3e-06 55.5 111 63.1
Lj1g0002881 Lotus japonicus HOM05D000311 ORTHO05D000183 3.3e-06 55.5 116 63.8
QL04p003748 Quercus lobata HOM05D000311 ORTHO05D000183 3.3e-06 55.5 119 62.2
Hund09289 Selenicereus undatus HOM05D000311 ORTHO05D000183 3.3e-06 55.5 116 63.8
Cfa012368 Carpinus fangiana HOM05D000311 ORTHO05D000183 4.3e-06 55.1 119 61.3
Duzib212G0440 Durio zibethinus HOM05D000311 ORTHO05D000183 4.3e-06 55.1 118 63.6
Duzib212G0990 Durio zibethinus HOM05D000311 ORTHO05D000183 4.3e-06 55.1 118 63.6
Prupe.1G067000 Prunus persica HOM05D000071 ORTHO05D000029 4.3e-06 55.1 113 32.7
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 4.3e-06 55.1 33 72.7
Dinv11725 Davidia involucrata HOM05D000311 ORTHO05D000183 5.6e-06 54.7 122 39.3
Duzib212G0734 Durio zibethinus HOM05D000311 ORTHO05D000183 5.6e-06 54.7 121 60.3
Nn8g40065 Nelumbo nucifera HOM05D000311 ORTHO05D000183 5.6e-06 54.7 121 61.2
QL02p090841 Quercus lobata HOM05D000311 ORTHO05D000183 5.6e-06 54.7 119 62.2
BolC2t08458H Brassica oleracea HOM05D000311 ORTHO05D018764 7.4e-06 54.3 119 56.3
CiPaw.04G177900 Carya illinoinensis HOM05D000311 ORTHO05D000183 7.4e-06 54.3 113 65.5
COL.COLO4_20160 Corchorus olitorius HOM05D000311 ORTHO05D000183 7.4e-06 54.3 119 61.3
Gorai.010G228600 Gossypium raimondii HOM05D000311 ORTHO05D000183 7.4e-06 54.3 113 31.9
MBI18_g17393_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 7.4e-06 54.3 114 64.0
TWI32G1252 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 7.4e-06 54.3 116 61.2
TAR375G0143 Trochodendron aralioides HOM05D000311 ORTHO05D000183 7.4e-06 54.3 115 61.7
Haze_16590 Corylus avellana HOM05D000311 ORTHO05D000183 9.6e-06 53.9 114 61.4
Dinv08773 Davidia involucrata HOM05D000311 ORTHO05D000183 9.6e-06 53.9 35 68.6
QL05p014144 Quercus lobata HOM05D000311 ORTHO05D000183 9.6e-06 53.9 121 60.3
GSVIVG01012806001 Vitis vinifera HOM05D000191 ORTHO05D000122 9.6e-06 53.9 89 38.2


User provided reference genes

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