Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 3.2e-153 545.0 276 100.0
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 4.1e-100 368.6 262 73.7
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.4e-92 343.6 265 70.9
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 5.4e-92 341.7 260 70.4
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 4.6e-91 338.6 265 69.8
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 8.6e-90 334.3 276 67.0
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 4.3e-89 332.0 275 66.5
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.8e-88 329.3 222 76.1
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 2.4e-87 326.2 259 68.3
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 4.9e-85 318.5 245 67.8
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 3.2e-84 315.8 268 63.4
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 9.2e-84 314.3 265 66.0
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.2e-83 313.9 275 64.4
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 6.0e-83 311.6 274 62.4
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 7.8e-83 311.2 261 66.3
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 3.9e-82 308.9 276 63.0
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 5.1e-82 308.5 261 64.8
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.9e-81 306.6 252 67.5
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 3.3e-81 305.8 221 71.0
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 5.6e-81 305.1 273 61.2
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 5.6e-81 305.1 261 64.4
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 9.6e-81 304.3 264 61.4
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 9.6e-81 304.3 273 60.4
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 4.7e-80 302.0 276 61.2
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 8.1e-80 301.2 264 61.7
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 2.4e-79 299.7 273 59.3
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.4e-79 299.7 273 59.7
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.2e-78 297.4 265 60.8
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 2.0e-78 296.6 270 62.6
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 2.6e-78 296.2 281 58.0
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.6e-78 296.2 273 59.0
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 5.8e-78 295.0 268 61.2
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 5.8e-78 295.0 263 60.8
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 7.6e-78 294.7 263 60.8
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 2.9e-77 292.7 261 63.6
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 3.8e-77 292.4 283 59.4
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 6.4e-77 291.6 260 61.5
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 6.4e-77 291.6 261 62.8
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 3.2e-76 289.3 261 59.8
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 5.4e-76 288.5 262 59.5
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 9.3e-76 287.7 272 59.2
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 7.8e-75 284.6 279 58.1
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 5.1e-74 282.0 259 58.7
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 5.1e-74 282.0 262 58.8
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.1e-73 280.8 261 59.0
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 3.3e-73 279.3 276 56.9
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 7.3e-73 278.1 260 60.0
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.1e-72 276.6 271 57.6
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 4.8e-72 275.4 236 63.6
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 6.2e-72 275.0 272 57.0
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.1e-71 274.2 223 65.5
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.1e-71 274.2 262 59.9
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.4e-71 273.1 271 56.8
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.5e-70 268.9 271 56.5
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 9.9e-70 267.7 284 56.7
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 9.9e-70 267.7 264 57.6
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.3e-69 267.3 267 57.7
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 2.9e-69 266.2 284 54.6
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 4.9e-69 265.4 247 60.3
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.9e-69 265.4 261 56.7
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 4.9e-69 265.4 261 57.1
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 7.1e-68 261.5 220 65.0
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.6e-67 260.4 280 54.3
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 2.1e-67 260.0 226 61.5
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.6e-67 258.8 272 55.9
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 1.0e-66 257.7 228 61.4
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 1.3e-66 257.3 263 56.7
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.5e-65 253.8 262 56.5
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 4.3e-65 252.3 261 56.7
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 7.4e-65 251.5 262 56.5
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.6e-64 250.4 256 56.6
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 6.2e-64 248.4 256 56.6
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 2.4e-63 246.5 236 60.2
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 2.4e-63 246.5 258 55.8
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 9.0e-63 244.6 261 54.0
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 9.9e-62 241.1 234 56.8
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 9.9e-62 241.1 257 55.3
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 9.9e-62 241.1 257 55.3
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.3e-61 240.7 246 56.9
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.7e-61 240.4 240 57.1
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 6.4e-61 238.4 275 51.6
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 6.4e-61 238.4 260 54.2
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 3.2e-60 236.1 247 56.3
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 4.2e-60 235.7 256 54.3
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 4.2e-60 235.7 260 53.5
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 7.4e-57 224.9 171 69.6
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.1e-55 221.1 239 53.6
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.2e-54 217.6 246 53.3
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 2.9e-53 213.0 257 49.4
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.9e-52 210.3 213 55.9
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 8.7e-50 201.4 270 49.6
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.0e-45 188.0 263 47.5
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 1.3e-45 187.6 351 39.9
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.3e-45 187.6 264 46.6
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 1.7e-45 187.2 266 45.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 2.9e-45 186.4 222 48.6
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 2.9e-45 186.4 284 45.4
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 2.9e-45 186.4 284 45.4
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.1e-44 184.5 261 46.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.4e-44 184.1 262 45.4
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 3.2e-44 183.0 264 47.3
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 3.2e-44 183.0 277 46.6
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 4.2e-44 182.6 270 45.9
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.2e-43 181.0 271 46.5
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 2.1e-43 180.3 261 46.4
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 6.1e-43 178.7 155 59.4
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 5.1e-42 175.6 262 46.6
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 2.0e-41 173.7 279 43.0
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 9.7e-41 171.4 279 42.7
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 1.1e-39 167.9 111 74.8
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.8e-39 167.2 193 50.8
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 5.9e-38 162.2 185 53.0
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 3.0e-34 149.8 93 80.6
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.7e-32 144.1 178 49.4
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 1.7e-32 144.1 182 47.3
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-29 134.4 92 71.7
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 6.5e-29 132.1 195 47.2
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 5.5e-28 129.0 157 47.1
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 6.7e-26 122.1 214 41.1
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.1e-25 121.3 187 42.8
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.1e-23 114.8 123 53.7
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 5.9e-22 109.0 85 68.2
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 5.9e-22 109.0 70 78.6
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 7.7e-22 108.6 215 35.3
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 1.7e-21 107.5 215 38.1
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 9.4e-20 101.7 72 70.8
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 2.4e-15 87.0 55 80.0
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-15 85.5 125 43.2
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 9.1e-15 85.1 48 89.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 4.5e-14 82.8 62 62.9
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 4.7e-11 72.8 149 39.6
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 6.1e-11 72.4 66 54.5


User provided reference genes

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