Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 7.1e-212 740.3 374 100.0
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 3.1e-106 389.4 348 60.6
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.7e-96 357.1 355 55.5
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 3.8e-96 355.9 360 54.7
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 2.3e-93 346.7 351 53.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 6.2e-91 338.6 354 53.1
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 7.1e-87 325.1 342 52.9
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.1e-86 323.6 353 52.1
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 6.6e-85 318.5 346 50.0
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 3.3e-84 316.2 341 52.5
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.3e-83 314.3 353 51.0
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 1.6e-83 313.9 348 51.7
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 2.8e-83 313.2 358 50.3
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 2.8e-83 313.2 348 52.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 6.2e-83 312.0 362 50.0
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 6.2e-83 312.0 353 51.3
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 5.3e-82 308.9 349 50.1
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 1.2e-81 307.8 352 49.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.0e-81 307.0 289 57.4
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.0e-81 307.0 325 53.8
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 5.8e-81 305.4 289 57.1
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 5.8e-81 305.4 296 56.4
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 7.6e-81 305.1 346 51.4
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.9e-80 303.1 290 56.9
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.9e-80 303.1 309 54.7
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.8e-80 302.8 289 57.1
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 3.8e-80 302.8 353 50.1
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 1.4e-79 300.8 355 48.7
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 1.9e-79 300.4 349 49.0
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.9e-79 300.4 349 49.3
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 3.2e-79 299.7 352 49.1
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 9.3e-79 298.1 301 54.2
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.2e-78 297.7 361 45.4
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.6e-78 297.4 289 56.4
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 3.5e-78 296.2 339 51.9
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.6e-78 295.8 296 56.1
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.6e-78 295.8 291 54.3
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 4.6e-78 295.8 359 45.1
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 4.6e-78 295.8 302 55.0
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 6.0e-78 295.4 361 45.7
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.8e-77 293.9 348 50.0
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.8e-77 293.9 348 50.0
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 3.0e-77 293.1 326 50.0
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 3.0e-77 293.1 359 45.4
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.5e-76 290.0 350 48.0
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 3.3e-76 289.7 305 51.8
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 5.6e-76 288.9 300 53.7
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 7.4e-76 288.5 345 49.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.3e-75 287.7 351 47.0
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 3.1e-74 283.1 350 48.6
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 4.0e-74 282.7 350 48.6
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 9.0e-74 281.6 360 45.8
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.5e-73 280.8 299 49.5
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 7.6e-73 278.5 312 51.3
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.2e-72 276.9 304 48.0
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 3.8e-72 276.2 308 50.0
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.1e-71 274.6 350 43.7
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.9e-71 273.9 285 51.6
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 3.2e-71 273.1 356 45.2
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 4.2e-71 272.7 255 59.2
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 4.2e-71 272.7 308 48.7
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 7.1e-71 271.9 337 44.2
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 9.3e-71 271.6 345 43.5
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.6e-70 270.8 254 58.3
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 2.1e-70 270.4 345 43.5
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.6e-70 269.2 297 48.8
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 1.0e-69 268.1 306 49.0
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 2.3e-69 266.9 301 51.2
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 8.7e-69 265.0 249 57.8
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 8.7e-69 265.0 299 48.5
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 1.1e-68 264.6 258 54.3
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.9e-68 263.8 362 45.3
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 5.6e-68 262.3 292 51.4
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 7.4e-68 261.9 285 52.3
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 7.4e-68 261.9 357 47.3
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.6e-67 260.8 353 43.3
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 2.8e-67 260.0 309 48.2
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.8e-67 260.0 264 54.5
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 8.2e-67 258.5 301 48.8
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 1.4e-66 257.7 306 47.7
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 9.0e-66 255.0 345 42.0
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.6e-65 253.4 357 44.3
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 5.8e-65 252.3 306 48.0
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 5.8e-65 252.3 306 48.0
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.3e-64 251.1 306 47.1
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.7e-64 250.8 310 46.8
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.9e-64 250.0 306 47.1
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 7.1e-63 245.4 300 48.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.2e-62 244.6 348 41.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 6.0e-62 242.3 352 42.6
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.8e-61 240.7 291 47.4
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.9e-60 237.3 261 50.2
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.1e-52 211.5 318 40.6
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 5.9e-49 199.1 226 49.6
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 1.0e-48 198.4 316 41.1
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.4e-47 194.5 297 41.8
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.5e-47 193.7 238 50.4
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 2.5e-47 193.7 225 48.0
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 2.4e-42 177.2 166 59.0
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-41 174.5 172 58.7
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.5e-41 174.5 172 58.7
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.9e-31 141.0 245 39.6
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 4.7e-30 136.3 371 29.9
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-29 134.8 160 45.6
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.8e-29 132.5 126 54.0
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.8e-29 132.5 126 54.0
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.1e-26 125.2 156 49.4
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 5.0e-24 116.3 301 31.2
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 6.5e-24 115.9 159 44.7
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.5e-23 114.0 172 45.9
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.5e-23 114.0 128 43.0
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 4.7e-22 109.8 277 32.1
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 8.0e-22 109.0 115 49.6
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.2e-17 95.1 130 47.7
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 7.2e-15 85.9 101 51.5
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 4.9e-11 73.2 330 24.8
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 2.9e-08 63.9 422 22.0
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.6e-06 58.2 63 54.0


User provided reference genes

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